Desulfoluna limicola: DSLASN_21930
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Entry
DSLASN_21930 CDS
T07859
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dek03021
]
DSLASN_21930 (rapA)
Transcription machinery [BR:
dek03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
DSLASN_21930 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
Tudor_RapA
DEAD
ResIII
Flavi_DEAD
Spc24
Cas3-like_C_2
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BCS96561
UniProt:
A0ABN6F500
LinkDB
All DBs
Position
2749512..2752304
Genome browser
AA seq
930 aa
AA seq
DB search
MNPFVVGQRWISETEPELGLGTVWAVEGRRVTVRFQESDCTRQYAAASAPLRRVTFNPGD
AVTSRQKESFAVDTVEEIEGILVYCGEGYQLYESELADTLSFSTPLDRLTGGFSDSSGLF
DLRMEALSHHLSAKASPVRGFLGGRVDLIGHQFHIAHEVAGRHLPRVLLADEVGLGKTIE
ACLILHRLLLTEQVARVLILVPDALVHQWFVELLRRFNLHFRIANETHFQEMEQVDPECN
PFAEDQLFLAPMAILESEERMFQALDSGFEMVVVDEAHHMEPRSHSFRCVEALSRLSRGL
LLLTATPEQMGRKSHFAQLRLLDPARYPSFEQYEKEADQHQNTAALAGKILDNDVLTNQE
QAELADILGAPDIQESLETDPTAIVDDLLDRHGPGRVIFRNTRKVIQGFPARMPNLYRLD
ASTEATGRHHDELLHDATPGSPMPELSDDPRITWLAELLKEHRDEKVLLICSTREKVQAV
EAALTRHLSIKIALFHEEMTLIQRDRNAAWFSETDGARLLICSEIGSEGRNFQFARHLVL
FDLPLNPEKVEQRIGRLDRIGQRHDIQIHVPFLAKSASEISARWYNAMGIFTGCIPGLHT
IGSTFKVPLESLMQTAMNSRPFPEAQLSDLLSETEAFTKRLSEELQKGRDRLLELTANRP
ERITELLSMVRKNDQSTNLCRFILRLFRHHGIEMDEAGTSNFLLEFKEDDDPALPLPPFR
RNPLAVTFDRKTALQREEIEFLTADHPMVVGALESFLGSESGNASLATFQDAGEQGLLLE
LIGVPECVAPSHLRVDRFLPTAPFRLVLDHTGDEVTEAWQPRDLSGNLEDLPASWLSEHP
TISRELLPGLMKQGTANMENQSKAVIKKATAAMTAFMDHEIDRLTTLKLTNPNVTGEEIN
ALKAEKNAMAGALENCRIRLDAMRLVLLMP
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatttgttgtgggccagcgctggatcagcgaaaccgagccggagctcggactg
ggaaccgtctgggccgtggaaggaaggcgggtcaccgtccggtttcaagagagcgactgc
acaagacagtatgcggcggcatccgcgcctttgcggcgggtcacctttaaccccggagac
gccgtcacaagcagacagaaagagtcctttgccgtggacacggtggaagagatcgaaggg
atcctcgtatactgcggagaaggctaccagctttacgaatccgagcttgccgacaccttg
agcttctccacccccctggatcgccttaccggtgggttctccgattcttcgggcctcttt
gacctgcgcatggaggctctgtcccaccatctttcagccaaggcctcaccggtacggggc
tttctcggaggccgggtggatctcatcggccaccagttccatatcgcccacgaagtggcg
gggcgccatcttccccgcgtgctcctggccgatgaagtgggcctgggaaaaaccatcgag
gcctgcctcatccttcatcgcctcctccttaccgaacaggtggcccgggttcttattctt
gtgcccgacgcccttgtccaccaatggtttgtggaactcctcaggcgattcaaccttcat
ttccgcatcgctaacgaaacccattttcaggaaatggaacaggtcgatccggagtgcaac
ccctttgccgaagaccagcttttcctggcccccatggccatcctggaatcggaagagcgc
atgtttcaagccctggactccggtttcgagatggtggtggtcgacgaagcccatcacatg
gagccgcgaagccacagcttccgatgcgtggaggccttaagtcgcctcagccgcgggctg
ctccttctcaccgccaccccggaacagatgggccgcaagagccactttgcccaactgcgg
ctgctggacccggcccgttaccccagctttgagcaatacgaaaaagaggccgatcagcac
cagaacaccgcagcacttgccggcaaaatcctggataacgacgttttaaccaatcaggaa
caggccgagcttgcggatatcctcggagcccccgacattcaagagtcccttgagacagac
cccaccgccatcgtggacgacctcttggatcgtcacgggcccggccgcgtcattttccgt
aacacccgaaaagtcatccagggctttccggcccggatgcccaatctttacagacttgac
gcatcaaccgaggccaccggtcgtcaccacgatgagctgctccacgatgcaacgcccggg
tcccccatgccggagctgtcggacgaccccagaatcacctggctggccgaactgctgaaa
gagcaccgcgatgaaaaggtccttttgatctgcagtacccgggaaaaggtccaggccgtt
gaagcggcccttacccggcacctctccatcaagatcgccctcttccacgaagagatgacc
ctcatccagcgagacagaaacgctgcctggttctctgaaacggacggtgcacgccttctc
atctgctcggagatcggcagcgaaggacgaaacttccagttcgcacggcacctggtcctc
tttgacctccccttaaaccctgaaaaggtggagcagcgcatcgggcgcctcgaccgcatc
gggcagagacacgacatccagatccacgtgcccttcctcgccaagagcgccagcgaaatc
tctgcgcgatggtacaacgccatgggtatcttcaccggctgcatcccgggacttcacacc
atcggcagtacctttaaagtgccccttgaaagcctcatgcaaacggccatgaacagcagg
ccgtttcctgaagcccaattgagcgatcttctgtccgaaaccgaggcgttcacaaaacgt
ctttcggaagaactccaaaaagggcgagatcgccttttggagctcaccgccaatcgcccc
gagcgcatcaccgaacttctgagcatggtcaggaaaaatgatcagtccacgaatctttgc
cgctttatcctccgtctgttcaggcaccacggcatcgagatggacgaggcaggaacgagc
aactttctcctggagttcaaggaagacgacgacccggccctgccccttccgcccttccgg
cggaatccccttgccgttaccttcgaccggaaaacagcactccaacgcgaagagatcgaa
ttccttacggccgatcaccccatggtggtgggcgccctggagtccttcctcggctccgaa
tcgggcaacgcctccctggccacattccaggatgccggggaacagggactcctgctggaa
ctcatcggtgtccccgaatgcgtggctccgtcacacctgcgcgtggacaggtttcttccc
acggcaccctttcgcctcgtccttgaccacacaggtgacgaggtcacagaagcgtggcaa
ccgagggacttgtccggcaaccttgaagacttaccggcctcatggctctccgaacaccca
accataagcagggagctccttcccggtcttatgaaacagggaacagccaacatggagaat
cagagcaaggccgtcattaaaaaagccacggccgccatgaccgccttcatggaccatgag
atcgaccggctgacaacccttaagctgacaaaccccaatgtcacaggggaagagatcaac
gccctgaaggccgaaaagaacgccatggccggtgcccttgagaattgccgcatccgcctc
gatgccatgcgcctggtgctgctcatgccgtag
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