Desulfoluna limicola: DSLASN_23920
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Entry
DSLASN_23920 CDS
T07859
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dek
Desulfoluna limicola
Pathway
dek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSLASN_23920 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dek03019
]
DSLASN_23920 (recQ)
03400 DNA repair and recombination proteins [BR:
dek03400
]
DSLASN_23920 (recQ)
Enzymes [BR:
dek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSLASN_23920 (recQ)
Messenger RNA biogenesis [BR:
dek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSLASN_23920 (recQ)
DNA repair and recombination proteins [BR:
dek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSLASN_23920 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCS96760
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All DBs
Position
3015418..3017253
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AA seq
611 aa
AA seq
DB search
MHHPTPETTLKDTFGYEAFRGNQKEIIDHLIEGGDALVLMPTGGGKSLCYQIPGLLRQGT
AVVVSPLIALMQDQVEALRQNGVKAGSLNSALTQGSALQMERAMVQGELDLVYVAPERLM
TPRFQDLLSQTHVSLFAIDEAHCVSQWGHDFRPEYMQLAILAERFPQVPRIALTATADPI
VREEMAERLHLTQAKRFVSSFDRPNIRYRIVVKNNPKKQLQDFIEREHDEDSGIVYCLSR
KKVESTAAWLSDRGYTALPYHAGLPQDVRAENQRRFITEDQVIIVATVAFGMGIDKPDVR
FVAHLDLPKNLESYYQETGRAGRDGLPADAWMAYSLGDAVFLRQMLDSSDGNETFKRIQH
QKLNAMLGFCEITGCRRQALLTYFGETLDTPCGNCDTCLEPIDTWEGTTEAQKALSCVYR
TGQRFGAGHLINVLLGKITEKVEGCGHENVSTFGIGKDRSDSEWRSVYRQLVAAGLLSVE
AQTGGFRLNERSMPVLKGQEQVLFRKDPTPARKGTKSAKRAHASRLMEEVCVAPGARALW
DKLKTFRKETAKEAGIPPYLVFNDATLADLIEKMPTDDIEMLSVSGIGQQKLSSYGDEIL
AIIDEHLKDFI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacccaaccccggaaaccacccttaaagacacctttggttatgaagccttcagg
ggcaaccagaaagagatcatcgaccacctcatcgaaggcggcgacgccctggtcctcatg
cccacagggggtggaaaatccctttgctatcaaatccccggcctcttaaggcagggaacc
gccgtggtggtctcccccctcatcgccctcatgcaggaccaggtggaagccctgaggcag
aacggggtcaaggcgggcagcctcaactcggcccttacccagggaagtgcccttcagatg
gagcgcgccatggtccagggagagctggacctggtctacgtggcccccgagcggctcatg
acgccccggtttcaggacctgctctcccagacccatgtctctcttttcgccatcgacgaa
gcccactgcgtctctcagtggggccacgatttccgccccgagtacatgcagctggccatt
ctggccgagcggttcccccaggttccccgcatcgccttaacagccaccgccgatcccatt
gtgcgggaagagatggccgaacggcttcacctcacccaggcaaaacgattcgtctcgagc
ttcgaccggcccaacatccgctaccgcatcgtggtgaagaacaaccccaaaaagcagctc
caggattttatcgaacgggagcacgacgaagactcgggcatcgtctactgcctgagccgc
aagaaagtggagtccaccgccgcctggctgtccgacagagggtacaccgccctgccctac
cacgccgggctgccccaggacgtcagagcggaaaaccagcgccgctttatcaccgaggac
caggtgatcattgtggccaccgtcgcctttggcatgggcatcgacaaacccgacgtccgc
ttcgtggcccacctcgacctccccaaaaacctggagagctattaccaggagacaggcagg
gccggccgggatggcctccccgccgacgcctggatggcctacagcttaggcgatgccgtc
ttcttgaggcagatgctggactcttcggacggaaacgaaacattcaaacgcatccagcac
cagaagctaaacgccatgctgggcttctgcgaaatcaccgggtgcagaagacaggccctc
ctcacctacttcggtgagacccttgacaccccctgcggcaactgcgacacctgcctggag
cccatcgacacctgggaaggcaccaccgaagcccagaaagccctctcctgtgtctaccgt
accggccagcgcttcggcgcaggacacctcatcaatgtgctgctgggaaaaatcaccgaa
aaagtggaaggctgcggccacgagaacgtctccaccttcggcatcggcaaagatcgctct
gacagtgagtggcgatctgtctacaggcaactggtggcagccggcctcctgagcgtggag
gcccagaccggcggctttcgcctcaatgaaaggtccatgcccgtcttaaaagggcaagag
caggtcctcttcagaaaagaccccaccccggcccgaaaagggacaaaatcggccaaacgc
gcccacgcctcccgcctcatggaagaggtgtgcgtcgctcccggtgcccgcgccctctgg
gataagttaaaaaccttccggaaagagaccgccaaagaggccggcatccccccctacctc
gtcttcaacgacgccaccctcgccgacctcatcgaaaaaatgcccaccgacgacatcgaa
atgctctccgtctccggtatcggccagcaaaaactttcctcttatggcgacgaaatcctg
gccatcattgatgagcacttgaaagacttcatataa
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