Desulfoluna limicola: DSLASN_24960
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Entry
DSLASN_24960 CDS
T07859
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dek03009
]
DSLASN_24960
Ribosome biogenesis [BR:
dek03009
]
Prokaryotic type
ribosomal protein modification factors
DSLASN_24960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
TPR_11
TPR_19
TPR_16
TPR_14
TPR_6
TPR_7
TPR_CcmH_CycH
TPR_9
TPR_17
ANAPC3
TPR_15
TPR_10
TPR-S
NatA_aux_su
ARM_TT21_N
Iml2-TPR_39
BTAD
PknG_TPR
MIT
TPR_21
Motif
Other DBs
NCBI-ProteinID:
BCS96864
LinkDB
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Position
3149055..3150788
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AA seq
577 aa
AA seq
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MSVKIVLEDAIKTCTSDQDKIISPEETVARFKEKAEHLDLDIFKETSRIDNGRLDIPVFF
SICGKDAAALTGTVKQMGKGATPQQSEASAVMELAERFSFFAFKAEESHFFTDTYRNVKD
RALPFHLIAKSVHDNETSPEAAEAIFSDIPFQWTPAFNLTTGNEVLIPFDWFFAINEFNG
PSAGNCKEEAICQGISEIVERHVCSLVSHEKRVTPTIDPDTTTDPAVKEMLSKYRKNGIE
LVFSDLSLDTGIPTVGVFAWDPSTFPGSSELVWTAGTAPDPEKAISRAMTEVAQLSGDFN
TCANYVASGLPKYTDLNEAEFITRPQTPVPISSLPDLSDANIKVEIERYVEALKSIDMEI
LLIETTHPELGIPAFYTIIPGAHFRERSLGTSVPMFAAKLVTEKFEPATALSRIAEMEKT
VGERYYFHFYRGQLLLNQEAFDEAIEAFEKALTASPHEQEVPSICSWMGVCLKETGRYRE
ALKILQTGIDIDPEREDIYNLMGFCHYILADHEKAIDAFREVLRLNPNSAIDYANIASNY
RELGETEKAITYYKMALEMDATIDFARDNLEKLAVAV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaaatagtactggaagatgcaatcaaaacctgtaccagtgaccaggacaaa
ataatctccccggaagagaccgtggcccggttcaaagagaaggcagagcacctcgacctc
gacattttcaaagagacatcaaggatcgacaacggcagactggatattccggtgtttttc
agcatctgcggcaaagatgccgccgccctcacgggaacggtcaagcagatgggcaaaggg
gcaaccccccagcagtcagaggccagcgccgtcatggaactggcggagcgcttcagcttt
ttcgctttcaaggcagaggaaagccacttttttaccgacacctatcgcaacgtcaaagat
cgggccctcccctttcacctgattgccaagtcggtccatgacaatgagaccagcccggaa
gcggccgaagccatcttctcagacatcccctttcagtggacaccggcctttaacctcacc
acaggaaacgaggtgctcatcccttttgactggttctttgccatcaacgagttcaacggc
ccttccgccggcaattgcaaagaagaggccatctgccaggggatctcagagatcgtggaa
cgccatgtctgctcactggtcagccacgaaaaacgggtcacccccaccatcgacccggac
accaccaccgaccccgccgtgaaggagatgctttcaaagtaccggaaaaacggtatcgaa
ctcgtcttctccgacctctcccttgacaccggaatccccaccgtgggggtgttcgcctgg
gatccctcgacctttcccgggtcaagtgaactggtctggaccgccggcacggctcccgac
cctgaaaaagcgatcagtcgcgccatgacggaggtggctcagctgtcaggagacttcaac
acctgcgccaactatgtggccagcgggctgcccaagtacaccgatttgaacgaggcggag
ttcatcacccgcccccagaccccggtgcccatctcctcccttcccgacctgtcggatgcc
aacatcaaggtggagattgagcgctatgtggaggccctgaaatccattgacatggagatc
ctcctcatcgagaccacccacccggagctgggcattccagccttctacaccatcatcccc
ggcgcacacttccgtgagcggagcctgggcaccagcgtccccatgttcgccgccaaactc
gtcaccgaaaaattcgaaccggcgacggccctgtcccgtatcgcggagatggaaaagacc
gtgggggaacgttactacttccacttctacagaggccagctcctgctcaaccaggaagcg
ttcgacgaggccatagaggcctttgaaaaagcacttaccgccagcccccacgagcaggaa
gtgccctccatctgctcctggatgggggtttgcctcaaggagaccggccgctacagagaa
gccctgaaaatccttcagaccggtatcgacatcgaccccgagcgtgaagacatttacaac
ctcatgggcttttgccactacatcctggccgaccacgaaaaggccatcgacgccttccgt
gaggtccttcgcttaaaccccaactcggccatcgactatgccaatatcgcctccaactac
cgggagctgggggaaaccgagaaagccatcacctactacaaaatggccttggagatggac
gccaccatcgactttgcccgagacaacctggaaaaactggccgtggctgtctga
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