Desulfoluna limicola: DSLASN_25400
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Entry
DSLASN_25400 CDS
T07859
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dek
Desulfoluna limicola
Pathway
dek03030
DNA replication
dek03410
Base excision repair
dek03420
Nucleotide excision repair
dek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSLASN_25400 (polA)
03410 Base excision repair
DSLASN_25400 (polA)
03420 Nucleotide excision repair
DSLASN_25400 (polA)
03440 Homologous recombination
DSLASN_25400 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dek03032
]
DSLASN_25400 (polA)
03400 DNA repair and recombination proteins [BR:
dek03400
]
DSLASN_25400 (polA)
Enzymes [BR:
dek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSLASN_25400 (polA)
DNA replication proteins [BR:
dek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DSLASN_25400 (polA)
DNA repair and recombination proteins [BR:
dek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DSLASN_25400 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSLASN_25400 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BCS96908
LinkDB
All DBs
Position
3199400..3202081
Genome browser
AA seq
893 aa
AA seq
DB search
MTDKKKLYLIDGSAYIYRSFHALPPLTNAEGLPTNAVLGFTNIIVKMMNDFAPTHAVICF
DAKGPTFRHEMYEEYKANRPPMPDDLRQQLPFVRKVAEAYRIPTMEQQGLEADDVIGTLA
KKGEAAGFDVVIVTGDKDFMQLVSETCVISDPARDVYLDRDAVKEKLGVWPEQVVDIMAL
TGDTSDNIPGVPGIGKKTAPDLINQFGSLDGLYEQVETITKKKQKENLITNKDLAFISRD
LVTIKTDADLPFDEEAFCVPEPDGEALLELFKELGFKKYIKMYSSPRKKVAKKYHAVLTE
EALADLADKIKAAPMVAVDTETTALDPMLAEVVGISVAVEPHEAYYIPFGHTGLESEKQL
SKEAVFSVMKPILEDASIPKCGQNIKYDILALKGSGIDLAGVTFDTMIASYILNPTRRGH
GLDDLAMDLFDHQNIKFEEVAGKGKNQLIFSEVPLSQAVPYAAEDADITLMIAQLFQKEL
SENEGLNNLFTTMEMPLMHILAEMEYAGVAVNEEELVDISKTFETEMNTIEESIYKLAGE
EFNINSSQQLGYILFEKLELPVQKKTKKKTGYSTDAEVLTALAAMHELPAQIIRFRTLSK
LKSTYADALVELIHPKTGRIHTSYNQTVAVTGRLSSSNPNLQNIPIRSDEGRMIRGAFVP
EKGFKLIAADYSQIELRLLAHCSGDPILIESFNSGEDIHKRTAAEMFDCDALFVTGEMRR
QAKAVNFGIMYGMSPFGLSKELGITQKMAKSFIENYFARYNGVKTFIDTCINEAEKTKTT
STLLGRIRPLPEITSSNRNVKQFAERSAVNTPIQGTAADLIKLAMIHCSAIIKEKNLKTR
MIMSVHDEIVFEAPEAEVDEVKILMQQAMENVWELAVPLSVNIEVGDNWNEAH
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagaagaaactctacctcattgacggcagtgcttacatataccgcagcttt
cacgcccttccccccctgaccaacgccgaagggctccccaccaacgcagtattgggcttt
accaacatcatcgtcaagatgatgaacgactttgcccccacccacgccgtcatctgcttt
gacgccaagggccccaccttccgtcacgagatgtacgaggagtacaaggccaaccgcccc
cccatgcccgatgacttaaggcagcagctcccctttgtccgtaaagtggccgaagcctac
cgcatccccaccatggaacagcagggccttgaagcagatgacgtcatcggcaccctggct
aaaaaaggcgaagccgcaggctttgatgtggtcatcgtcaccggggacaaggacttcatg
cagctcgtctccgagacctgcgtcatctccgaccccgcgcgggacgtctaccttgaccgc
gacgcggtgaaagagaaactcggcgtctggcccgagcaggtggtggatatcatggcgctt
accggcgacacctcggacaacatccccggcgtcccaggcatcggcaaaaagaccgcaccg
gacctcatcaaccagttcggctccctggacggcctctacgagcaggtggagaccatcacc
aagaagaagcagaaagagaaccttatcaccaacaaggacctcgccttcatcagccgggac
ctggtcaccatcaaaaccgacgccgacctccccttcgacgaagaggcgttctgcgttccc
gaaccggacggcgaagccctcctggagcttttcaaagagctgggctttaaaaagtatatc
aagatgtacagcagcccccggaaaaaagtcgccaaaaagtaccacgccgtgctgacggaa
gaggcccttgctgacctcgccgacaagataaaagccgcccccatggtggccgtggacacc
gagaccaccgcccttgaccccatgctggctgaagtggtgggcatctccgttgccgtcgag
ccccatgaggcctactacatccccttcggtcacaccggcctggagtctgaaaagcagctc
tccaaagaagccgtcttctccgtcatgaagccgatcctggaagacgcaagcattcccaag
tgcggccagaacatcaagtacgatatcctcgccctcaaggggtccggcatcgaccttgcc
ggtgtcaccttcgacaccatgatcgcctcctacatcctgaaccccacacggcgaggccac
ggcctggacgacctggccatggacctcttcgaccaccagaacatcaagtttgaagaggtg
gccggcaaaggcaagaaccagttgatcttctccgaagtacccctctcacaggccgtgccc
tacgccgccgaagacgccgacatcaccctcatgattgcccagctgtttcaaaaagaactg
agcgagaatgagggattgaacaacctctttacgaccatggagatgcccctcatgcacatc
ctggccgagatggaatacgcaggtgttgccgtcaacgaagaggagcttgtggacatctcc
aagacctttgaaaccgagatgaacaccatcgaagagagcatctacaaactcgccggagaa
gagttcaacatcaactcctcccagcagctcggatacatcctcttcgaaaaactggagctg
cccgtccagaagaagaccaaaaagaagaccgggtactccaccgacgccgaggtcttgacc
gcccttgccgccatgcacgaactcccggcccagatcatccggttccggaccctctccaag
ctcaaaagcacctacgcggacgccctggtggaactgattcacccgaaaacaggccggatc
cacacctcctacaaccagaccgtggccgtcaccggacgcctgagcagctccaaccccaac
ctccagaacattcccatccgaagcgacgaaggccgcatgatccgcggcgcctttgttccg
gaaaaagggtttaaactcattgccgccgactactcccagatcgagctgcgcctcctggcc
cactgctccggcgaccccatcctcatcgagtccttcaacagtggtgaggatatccacaaa
cgcaccgccgccgagatgttcgactgcgatgccctctttgtcacaggcgagatgcgccgc
caggccaaagccgtcaacttcggaatcatgtacggcatgagccccttcggcctctccaaa
gagctcggcatcacccagaaaatggccaaaagctttatcgagaactactttgcccgctac
aacggcgtaaaaacctttatcgatacctgcatcaacgaggccgagaaaaccaagaccacc
agcacgctcctgggacgcatccggcccctgccggaaatcaccagctccaaccggaacgtc
aagcagttcgccgaacgctccgccgtcaacacccccatccagggcaccgccgccgacctc
atcaaactggccatgattcactgcagcgcaatcatcaaagagaagaacctgaaaacccgc
atgatcatgagcgtccacgatgagatcgtcttcgaagccccggaagccgaagtggatgag
gtgaaaatcttgatgcagcaggccatggaaaacgtctgggagctcgccgtccccctctcc
gtcaacatcgaggtaggcgacaactggaacgaagcacattaa
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