Desulfoluna limicola: DSLASN_27460
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Entry
DSLASN_27460 CDS
T07859
Symbol
selB
Name
(GenBank) selenocysteine-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dek03012
]
DSLASN_27460 (selB)
Translation factors [BR:
dek03012
]
Eukaryotic type
Elongation factors
DSLASN_27460 (selB)
Prokaryotic type
DSLASN_27460 (selB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
SelB-wing_2
GTP_EFTU_D2
MMR_HSR1
SRPRB
RsgA_GTPase
FeoB_N
PduV-EutP
GTP_EFTU_D3
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
BCS97114
LinkDB
All DBs
Position
3463294..3465210
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AA seq
638 aa
AA seq
DB search
MKQIILGTAGHIDHGKTSLIRSLTGIETDRLKEEKTRGITIELGFASMTLPNGHHVGIVD
VPGHEKFVKNMVAGATGIDMVAMVIAADEGVMPQTREHMEICSLLGISHGVVVLTKTDLV
DDEWLELVQEDISGFLEGTFLEGAPMIPVSSATGQGMDALKNALADLAETVPQRRTASLF
RLPVDRVFSMKGFGTVITGTVVSGSISVGDAVTIYPSGVESKVRGIQVHSDSVETASSGM
RTAINFQGLEKSAIERGEVVSTPGDIKPSYLVDVEFLYLPSAKKPLKNRTRIRLHTGTSE
VLGYLILLDRESLDAGDTAAVQLRLEEPVSCIKDDRYVIRSYSPVRTIGGGRILNPIPPK
HKRFREDVVTGLAGLMVNELPEIISFHVTQSGYAGLPFSDLKLMTNCSEKQLTGALSGLL
SKRVVIQTDKETRTLIHGDTFTRLTEIAKEYLAEYHKTNPLKEGMSKEELKSKFPEILGS
RVFTLTLNHLVGEHAVILTSDTVKLATHTVELQVDQEQLKKDILKAYGDTALTPPYFKAL
CETLEVPVTKAKDVLLLLVKEGTLVKVKEDLYFDQAALEGLKSRVLTFFASNTEMTTADF
KEMTGGVSRKYLIPLLEYYDGMNLTIRVGDTRQLRGRG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagatcatactcggcacggccggccacatagaccacggaaaaaccagcctcatc
agaagtttgaccggcattgaaaccgatcgactgaaagaggagaaaacccgcggcatcacc
atagagctcggattcgcctccatgacccttcccaatgggcatcatgtggggatcgtggat
gtccccggccatgaaaaatttgtcaaaaacatggtggcaggggcgaccggcatcgacatg
gtggccatggtcattgctgccgatgaaggcgtgatgccccaaacccgtgagcacatggag
atctgttctctactgggcatctcccatggggttgtggtcctcaccaaaacagacctcgtg
gatgatgaatggctggagctggttcaggaggacatctctggttttctcgaaggcaccttt
ctcgaaggggccccgatgattcccgtctcctccgccacaggccagggaatggatgcactc
aaaaatgcactggccgacctggctgaaaccgttccgcaacgccggacggcctcccttttc
cggctccccgtggacagggttttctccatgaaagggttcggaaccgtaatcaccggcacg
gtggtctcgggaagcatctcagtgggagacgccgtcacgatctacccttccggtgtagag
tccaaggtcaggggcatccaggtccacagcgacagcgtggaaacagcctcttcaggcatg
cgcaccgccatcaacttccaggggcttgaaaaaagtgccatcgaacgcggagaggtggtc
tccaccccgggtgatatcaagcccagctacctggtagatgtggagttcctctacctgccc
agcgccaaaaagcccttgaagaatcgcacccgcatccgcctgcataccggcaccagcgag
gttctgggatacctgatccttctcgaccgggaatcccttgatgccggagacaccgcggct
gtacagctgcgcctcgaagaacccgtcagctgcatcaaagacgaccggtatgtcatcaga
agctactcacctgtccgcaccatcggcggaggacgcatcctgaaccccatccccccgaag
cacaaacgtttccgggaagatgtggtcaccgggcttgccggacttatggtgaatgaactt
cccgagatcatctcctttcacgtcacgcagtcagggtacgcaggccttcccttctcagac
ctgaaactcatgaccaactgcagcgaaaaacagctgaccggagccctttccggcctcctt
tccaagcgggtggtcattcagactgacaaagagacacgcacactgatccatggggacacg
ttcacccgcctcaccgaaattgccaaagagtacctggccgagtaccacaagacaaacccc
ttgaaggagggaatgtcaaaggaggagttgaaatccaaattccccgaaatccttgggagc
cgggtcttcactctcacgctcaaccacctcgttggcgaacatgccgtgattctcacctcg
gacacggtaaaactcgccacccataccgttgaacttcaagtagaccaggagcagctgaaa
aaagacatcctcaaagcctacggtgacacggcccttaccccgccctacttcaaggccctg
tgcgagacccttgaagtacctgtcaccaaggcaaaagacgttctccttctccttgtcaag
gagggaaccctggtaaaggtcaaagaagatctctactttgaccaggctgcactcgagggg
ctgaaatcacgtgttctgaccttttttgcatccaacaccgaaatgaccaccgccgacttc
aaagagatgaccggtggcgtatccaggaaatacctaattcctcttcttgagtactatgac
ggcatgaacctcaccattcgggttggagacacccgtcaattgaggggccgcggctga
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