Desulfoluna limicola: DSLASN_27760
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Entry
DSLASN_27760 CDS
T07859
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dek02044
]
DSLASN_27760
02035 Bacterial motility proteins [BR:
dek02035
]
DSLASN_27760
Secretion system [BR:
dek02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DSLASN_27760
Bacterial motility proteins [BR:
dek02035
]
Pilus system
Pilus assembly proteins
DSLASN_27760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Cu-binding_MopE
DUF1349
PQQ_3
GH43_C2
PQQ
Motif
Other DBs
NCBI-ProteinID:
BCS97144
LinkDB
All DBs
Position
3491856..3496424
Genome browser
AA seq
1522 aa
AA seq
DB search
MGNHTHPIHATGRSLPFAPRLAGLALLCLISLFILGPVPSAHGVGLPYNENFNYPKNSGL
PSEWLIQDQDNTEESYHNIRKKNHPPKNDLRIVSGGDDPLKHYYTVYLDEITGNFAATIQ
ITGLDNTTSSTKAGLIVQNNLGTDANNKAHIQVAVNRTSGYMMLFDDNGDGTADQSFTRE
ATVAPPNVWLKLIRSDNTFTGFYSTDGTTWETLGTVASTMAESDLNVGLFGYSGQKSWWL
WNRKSTSYFDNFTLTDDAATYVYYQDSDGDTYGDSSTSIVTSTDTAPSGYVDDNTDCDDT
DATIHPGATELCDGKDNNCDGDTDEGLSTITYYWDGDGDGYGTITNTRQGCTSTGVDNWV
TQGGDCNDNNYLINPGAADICGNNINEDCAGGDAVCFSDTICETISDIPLSVTIGGSPAI
IMFILDDSGSMEWSVMCAEDEGRFNGLDEYTDNYSRPRWKSQYHGYNRIYYNPGTTYEPW
PDSQSYTFTDADFASVAKHPMGFPSEALKNENHGSSTISLTREFDTIDGKTITFGHYYVT
STVDSQPYLIDLGSDSSGPAYYRVTQSRGDSEDHYRTVDSLASITPAEAAQKKVAIGSTF
AIAKTNFANWFTYHRTRETATKAALALALQDLSGIKVGIHTLNHSVIRPATPINSETDVK
AFLDHVYDVDRDGPTPMKLALEAVGQYFDATDGGLHGGIGDGTSPFSLSTDGGNCQQAFA
ILMTDGYGNGGAPRNEVGNADGDNNSDWDGTGTDGENATSSEFYGKDSKRLPDIAMYYYE
RDLVTTLDNEVPVQDPDYEATHQRMVTYTVAFGVQGENDPADYPDCPPSHPDNPLNCPTW
PSGGTNEVKVDELWHAAVNGRGKYINTGSPQELSDAINTVLNDITRRTGTAASVAVSSEK
LDTGLVIYQGYFDSGDWSGNLEAYNVDSDGVVDLTPEWSAKTQLDAVGWGDRIIFTKNDS
TGDTTPFRTRSSLSAAQGGYLTQDQLDYIRGDNSNEIEFSGPFRNRTSKLGDITHSSPIL
HKGHVYVGANDGMFHAFDADNGNEVFAYVPTFVYPNLAEYSSPNYVHKFYADGTATAKTV
GSSDWVVSGLRKGGRGLFGINVTSFETLAEGTPPAIWEYPTQAVPDDDMGYTYGEVTIAE
GNDSSAGGQLIFAANGYDSPNGRAVLLILRVDPASGQQRLFKKIDTGVGSSTPGNCNGLS
DPLVVDINDDGKADSVYAGDLLGNLWKFDVSSTSRTDWDVAYKTSDVSKPLFSAKNSTGQ
IQPITSKPSAMFHCDATHKGIIVVFGTGRMLSETDLDNTNTQTIYGIWDWQKEWDLNNGS
SDAMAYHMGTFNTPSGTPALRTLSNIDGNSLFPANVNLTLLQQTEESSSDAWRYTSNNAI
DWFSPATYLGLAAGASYTGGTHIGWYLDLPDEKERVITKTQIRDSKAYVVSIIPEPAPCA
SGGTTVGSILSACNGGQLDDPQWDTDGQNGVTSEDDNPSGKKFGDDIYYAPAIIEDKLFF
TKDRVEDTTDEVRGLFYWRIRD
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaccacactcaccccatacacgccactggccggtccctgccctttgcgccgcgt
ctcgccggcctggccctgctttgcctgataagcctctttatcctgggccctgtgccttct
gcccatggtgttggcctgccttacaatgagaactttaactacccaaagaattccggcctg
ccctcagaatggttgatccaagaccaggataacaccgaggagtcttatcataacattcga
aaaaaaaatcaccctcccaagaacgaccttcgtatcgtctccgggggcgatgacccgttg
aagcactactacaccgtgtatcttgacgaaataaccggtaactttgctgccaccatccaa
atcacaggcctcgacaacacaacgtcaagcaccaaagctgggctcattgtccagaacaac
ctgggcactgatgccaacaacaaggcccacatccaggtggctgtaaaccgaacttccggc
tacatgatgctttttgacgacaacggtgacggcacggccgaccaatcgtttacccgtgaa
gccactgttgccccccccaatgtctggctaaagcttatacgcagtgacaacacctttaca
ggattctacagcaccgacggcacaacctgggaaaccctgggaaccgtcgcctccaccatg
gccgaatccgacctgaatgttggactttttggttactccgggcaaaaatcatggtggctc
tggaatcgaaaaagcacctcatatttcgacaactttacccttactgacgacgcagccacc
tacgtctactatcaagactccgatggggacacctatggcgactcatcaacctctattgtc
acaagcacagacacagctccttccggttatgtcgatgacaacaccgactgcgatgacacg
gacgccacgatccatccgggagccacagagctgtgtgatggcaaagacaacaactgcgac
ggcgacaccgatgagggcctctccaccatcacctactactgggatggagacggggacggg
tacggaacgatcaccaacacacgtcaagggtgcacctcaacgggcgtcgacaactgggtc
acccagggcggagactgcaatgacaacaactatctcatcaacccgggtgccgccgacatc
tgcggcaacaacatcaacgaagactgcgcgggcggcgatgctgtctgcttttcagacacc
atctgtgagaccatctccgatatcccattgagcgtcaccatcggcggttcccctgccatc
atcatgtttatcctggacgactccggaagcatggagtggagcgtcatgtgcgctgaagac
gaggggcgattcaacggactcgatgagtacaccgacaactactccaggccccgctggaaa
tcgcagtatcacggatacaaccgcatctactacaaccccggcaccacctatgagccctgg
ccggactcgcaatcatacacatttaccgacgctgattttgcatccgtggccaagcacccc
atggggttcccatccgaagccctgaaaaacgaaaaccatggcagcagcaccatcagcctg
acccgggaatttgacaccatcgatggaaagaccatcacattcggacactactacgtaacc
tccacagtcgacagccaaccctacctcatcgaccttggcagcgacagttccggccccgcc
tactacagagtcacccaaagccggggtgattctgaggaccactaccggacggtggatagc
ctggccagcatcacgccagccgaggcggcccaaaaaaaagtcgccatcggcagcaccttc
gccattgccaaaacaaacttcgccaactggtttacctaccaccgaacccgggaaaccgcc
accaaggccgcactggccctggcccttcaggacctttcaggtatcaaggtgggcatccac
accctgaaccactccgtcatcaggcctgccacccccatcaacagcgaaacggatgtaaaa
gcgtttctcgatcatgtctacgatgtggacagggacggccccacccccatgaagctcgcc
ttagaggctgtggggcaatactttgatgccactgacgggggattgcatggcggcatcggc
gacggcaccagccccttcagcttatcaacagacggaggaaactgccaacaggcctttgcc
attctcatgaccgacggctacggcaacggcggagcccccagaaatgaagtgggcaacgcc
gacggcgacaacaactcggattgggatggcacaggaacggacggcgagaacgcaacgagc
agcgaattctacggaaaagattccaaaaggcttcccgatattgccatgtactactacgag
cgtgaccttgtcaccaccctggacaatgaggtgcctgtacaggaccccgattacgaagcc
acccaccaacgaatggtgacctacaccgtcgccttcggcgtccagggcgagaacgacccg
gcggactaccccgactgcccgccgagccacccggacaacccccttaactgccccacctgg
ccctccggcggtaccaacgaggtgaaggttgatgaactgtggcatgccgcggtgaacgga
agggggaaatacatcaacaccggcagcccccaggaactctccgatgccatcaacactgtt
ttgaatgacatcacacgcagaacaggcaccgccgcttccgttgcggtgagctccgaaaaa
ctcgacaccgggctggtcatttaccaggggtattttgacagcggggactggtcaggaaac
ctggaagcctacaatgtggactctgacggcgtggtggatctcacccccgaatggagcgcg
aaaacccagctggatgctgttggctggggggaccggataattttcacaaaaaatgattca
acgggcgacaccacacccttccggacgagaagcagcctttcggccgcccagggtggctac
ctgacccaggatcaactggactacatccggggtgacaacagcaatgaaattgagttcagc
ggcccctttcgcaatcgcaccagcaagttgggggatatcacccactcctcccccatcctc
cacaaagggcacgtctacgtgggggccaacgacggcatgttccacgcctttgacgcggac
aacggcaatgaggtcttcgcctatgtgcccaccttcgtctaccccaacctggcggagtac
tccagcccgaactacgtccacaaattctatgcggacggcaccgccacggccaagacagtg
ggaagctccgactgggtggtaagcgggctgagaaaagggggccgaggcctcttcggcatc
aatgtcaccagcttcgaaaccctcgcggagggcaccccacccgccatctgggagtacccg
acccaagccgttccggatgacgacatggggtatacctacggtgaggtcaccatcgccgag
ggcaacgacagctccgcgggaggccagctgatctttgccgccaacggctacgacagcccc
aacggacgagccgtccttctcatactcagagtcgaccccgcctcagggcagcagcgcctc
tttaaaaagatcgacaccggcgtcggcagcagcacccccggcaactgcaatggcctgagt
gatcccctggtggtggatatcaacgatgacgggaaagccgattctgtatacgccggcgac
cttctgggcaacctgtggaaatttgatgtctccagcacaagcagaaccgactgggatgtg
gcttacaaaacaagcgacgtaagcaaacccctcttttcggcgaagaacagcacggggcag
attcagcccatcacctccaagccctctgccatgttccactgcgatgccacacataaggga
atcatcgtggttttcggcaccgggcgcatgctttcggaaacggaccttgacaacaccaac
acccaaaccatctacggcatctgggactggcagaaggagtgggacctgaacaacggcagc
agtgatgccatggcctaccacatgggcaccttcaacaccccaagcggaacccctgcgttg
agaaccctttccaacatcgatggaaacagcctcttcccggccaacgtaaacctcaccctt
cttcagcagaccgaggagtcctcaagcgatgcatggcgctacaccagcaacaacgccatc
gactggttctcaccggccacctaccttggccttgcagccggtgccagctacacgggcggc
acccatatcgggtggtaccttgacctgccggatgaaaaggaacgggtcatcaccaaaacc
cagatccgggacagcaaggcctacgtcgtctccatcatccctgaaccggcgccttgtgcc
tccggaggcaccaccgtggggtcgatcctgagtgcctgcaacggtgggcagctggatgac
ccccagtgggatacggacggtcaaaatggggtaaccagcgaagacgacaacccgtccggc
aaaaagtttggcgacgacatctactacgccccggccatcatcgaagacaaactcttcttc
accaaggacagggtggaagataccacggacgaagtcaggggcctcttctactggcgcatc
cgagactaa
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