Desulfoluna limicola: DSLASN_27820
Help
Entry
DSLASN_27820 CDS
T07859
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dek02044
]
DSLASN_27820
02035 Bacterial motility proteins [BR:
dek02035
]
DSLASN_27820
Secretion system [BR:
dek02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DSLASN_27820
Bacterial motility proteins [BR:
dek02035
]
Pilus system
Pilus assembly proteins
DSLASN_27820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Cu-binding_MopE
PQQ_3
DUF1349
GH43_C2
VWA_2
PQQ
Motif
Other DBs
NCBI-ProteinID:
BCS97150
LinkDB
All DBs
Position
3500312..3504676
Genome browser
AA seq
1454 aa
AA seq
DB search
MSLPYNEDFNYSNGNNTPSAWKAQDQDDTSGTYHDIRKKSLRIVSGGSDKVEDYYTVYLN
DITGDFTATTQVKSLTDTTSITKAGLIVQNSLGSTTNTAHIQVAASRDTGYLMMFDDDGD
GSVDQTFSAAVGIAPPDVWLRVVRSGNTFSGFYSTDNSTWTLLGIVASSKAESELDVGLF
GFSGQFWWSSSWWPEISVAGFDNFSIIGSAATFTYHEDSDGDGYGNPSVSITSTSATPPS
GYVTDNTDCDDTDANTYPGATEICDGKDNNCDGTIDEGLSTNTYYRDADGDGYGTIIDTH
QGCSPNPGYVTTPGDCNDNNILINPGASDICGNNIDEDCSGGDAACFSDTICEPISDTPL
SVTVGGSAGIIMFILDDSGSMDWSVMCAEDEGRFNGLADYTANYSRPRWKSQYHGYNRIY
YNPGTTYKPWAASKSRTFSDATFTNALKHPLGYYCWALSHETSGNTISLTRTFDSYGGID
VTFGHYYVVSTTDSQPYLVDLGIKSSAPVYYKVTQSSGGASDNYRSVKSLTKVIDSGVPS
DVAITGTFTEARSNFANWFTYHRTREVATKAALGFALQDLSGVKVGIHTFNHSVTRPATL
ITTAADVEDFLDYVYQVDRDGPTPMRLALEDVGQYLDAQDSNNGGIGTNPFDTSANGGDC
QQAFAILMTDGYGNGGSPSVGNADADNNSKWDGPEFYGKNSNRLPDVAMHYYERDLVTAL
ADKVPVQDPDYEAPHQRMVTYTVSFGIEGDYDQADYPNCPPAHPDNAIDCPPWPSGGTNE
AKVDELWHAAVNGRGQYISTGTPQELSDAINSVLNDITRRTGTAASVAVSSEKLDTGLVI
YQGFFDSGDWSGNLEAYDVNASGVVNLSAKWSAKTQLNAANWDTGRTILTRNDATETTKA
FRYGNLSGTQKSNVTENQVDYIRGDNSLEEVRGGAFRNRNSKLADITHSSPVLHNGVVYV
GANDGMFHAFDAANGNELFAYVPSFVYPNLGEYTSPNYGHKFYADGTATARTVPTSTSSQ
DWVVSGLRKGGRGLFGINVTSPKTISETALPTIWEYPTLAVPDDDMGYTYGEVTIAQGND
SSAGDQLIFTSNGYDSPNGHAVLLILKLDGTLFKKIDTGVGSSTPGNCNGLSDPLVVDLT
DDGKADVVYAGDLLGNLWKFDISDPSKSNWKVAYETGGVSKPLFTAKNSSGQTQPITSKP
AAMFHCNPTKKGTILVFGTGRMLSDGDLDNTNTQTIYGIWDWQEEWARNGYSDTTPYHMG
TFNTPSGTPSMRTLSNIDGNNAFPATVDLTLLQQTQVSSSDDWRYTSNNAIDWFEVDTWK
NAKSAGTSYTGGVHLGWYLNLPDSKERVITKTQIRDGKAYIVSIIPEPAPCASGGTTVGS
ILNACNGGQLQDPQWDTNGDGVVDANDNSASGKKFDDDIYYAPAIIEDKLFFTKDRVENT
TDEIKGLFYWRIKE
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
gtgagccttccctacaatgaagatttcaactacagcaacgggaacaacaccccgtcagcc
tggaaggctcaggaccaggacgacacctcgggcacctaccatgacattcgaaagaaaagt
cttcgcatcgtctccggcggttcggacaaggtggaagactactacaccgtgtacctcaac
gacatcaccggtgacttcacggccacgacccaggtcaagagcctcacagacaccacgtcg
atcaccaaggcagggctcattgtccagaacagcctgggaagcaccaccaacacggcacac
atccaggtcgccgcgagtcgcgacaccggctacctcatgatgtttgatgacgacggtgac
gggtctgtggaccagacattctcagcagctgtaggtattgccccgccagatgtctggctt
cgggtggtgcgaagcggaaacaccttcagcggcttctacagcactgacaattcaacctgg
acactcctgggaatcgttgcctcatcaaaggccgaaagcgaactggatgtggggcttttt
ggattctccggacagttctggtggagcagctcatggtggccggaaataagtgttgccggc
tttgataacttttccatcatcggatctgccgccaccttcacctaccatgaggacagcgat
ggcgacggctacggcaacccgtcggtgtcaatcacctccacctccgccaccccaccatcc
ggctacgtcaccgacaacaccgactgcgatgacaccgatgccaacacctatccgggtgcc
actgaaatatgcgacggcaaggacaacaactgcgacggcaccatcgatgagggactgtcc
accaacacctactaccgggacgccgacggggacgggtacggcaccatcatcgacacccac
caggggtgcagccccaaccccggctatgtgaccacccccggggactgcaacgacaacaac
atcctcatcaatcccggagcgtctgacatctgcgggaacaacattgacgaggactgctcc
ggtggggatgccgcctgcttctcagacaccatctgcgagcctatctccgacacccccttg
agcgtcaccgtgggtgggtccgcaggcatcatcatgttcatcctcgacgactccggcagc
atggactggagcgttatgtgcgccgaggacgaaggccggttcaacggccttgccgactac
accgccaattacagccgcccccgatggaaatcccagtaccacggctacaaccgcatctac
tacaacccgggaaccacctacaaaccctgggctgcctccaagtccaggaccttttcagac
gccaccttcaccaacgccctcaagcaccccctggggtactactgctgggccctgagtcac
gagacctcgggcaacaccatcagtctgacccgcaccttcgacagctatggcggcattgat
gtcaccttcggccactactacgtggtttccaccaccgacagccagccctaccttgtcgac
ctgggtatcaaaagttcggcccctgtctattacaaggtcacccagagcagcggcggggcc
tccgacaactaccgatcggtgaaaagcctcacgaaggtcatcgactcgggggtcccgtcc
gatgttgccatcaccggaacctttaccgaagcgcgttccaacttcgccaactggttcacc
taccaccgcacccgtgaagtcgccaccaaggcagccctgggtttcgcacttcaggacctt
tccggcgtaaaggtgggcatccacaccttcaaccattcggtgacccgtcccgccaccctc
atcaccaccgctgccgatgtcgaggacttcctcgactacgtatatcaggtggaccgtgac
ggccccacccccatgcgccttgcccttgaagacgtggggcagtaccttgacgcccaggac
agcaataacggcggcatcggaaccaacccctttgacacctcggccaacggtggcgattgc
cagcaggcctttgccatcctcatgaccgacggctacggaaacggggggtccccttccgtg
ggcaacgccgatgccgacaacaactcaaaatgggacgggccggaattctacggtaaaaac
tccaaccgcctccccgatgtggccatgcactattacgaaagggacctggtcacagccctt
gcagacaaagtaccggtccaggatcccgattacgaagcgccccaccagcgaatggtcact
tacaccgtctccttcggtatcgaaggggactacgaccaggctgattaccccaactgcccg
cctgcccacccggacaatgccattgactgcccgccctggccctccggcggcaccaacgaa
gccaaggtggatgagctgtggcatgccgccgtcaacggtcgcgggcaatacatcagcacc
ggcaccccccaggagctctccgatgccatcaacagcgtgctgaacgacatcacccggagg
acgggaaccgccgcctccgttgccgtaagctctgaaaagctcgacaccggcctggttatt
tatcagggattctttgacagcggggactggtcgggtaacctggaggcatacgatgtgaac
gcaagcggtgtggtgaacctctctgccaagtggagcgccaaaacccaactgaacgctgca
aactgggatacgggtcgcaccattctcaccagaaacgacgccacagagaccaccaaagcc
tttcggtacgggaacctctcaggcacccagaaaagcaacgtcacagaaaatcaggtggac
tatatccggggagacaacagcctcgaagaggtccgtgggggggcattccgcaaccgaaac
agcaagctggccgacatcacgcactcctcccccgttcttcacaacggggtcgtctacgtc
ggggccaacgacggcatgttccacgcctttgacgcagccaacggcaatgaactctttgcc
tatgtgccctcgttcgtctaccccaacctgggcgagtacaccagccccaattacgggcac
aaattctacgcggacggcactgccaccgccagaacagtccccacgtccaccagtagccag
gactgggtggtgagcggcctgagaaaagggggacggggcctcttcggcatcaacgtcacc
agcccgaaaaccatctcggaaaccgcccttcccaccatctgggagtaccccaccttggcc
gtcccggatgatgacatgggctacacctacggtgaggtgaccatcgcccagggcaacgac
tcctcggctggagaccagctgatctttacctccaacggctacgacagccccaacggccat
gcggtgcttctcatcctgaaacttgacggcaccctcttcaaaaagatcgacaccggcgtc
ggcagctccacccccggcaactgcaacggcctgagcgatcctctggttgtggatttaaca
gatgacggcaaggccgacgtcgtctacgcaggcgacctgctgggcaatctctggaagttc
gacatctccgacccaagcaaaagcaactggaaggtggcatatgaaactgggggcgtgagc
aagcccctctttaccgcgaaaaacagctccggtcagactcagcccatcacctccaaaccg
gcggccatgttccactgcaaccccaccaaaaaagggaccatcctggtcttcggcaccgga
cgcatgctctcggacggagacctggacaacaccaacacccagaccatctacgggatctgg
gactggcaggaggagtgggcccgcaacggctacagcgacaccaccccctaccacatgggg
accttcaacaccccgagcggaaccccttcgatgagaaccctctccaacattgacgggaac
aacgccttccccgcaaccgtggatctcaccctgctccagcagacccaggtctcctccagt
gacgattggcgctacaccagcaacaacgccatcgactggttcgaggtggacacctggaaa
aacgccaagtcagccggcacctcctacaccgggggagtccaccttgggtggtacctgaac
ctgccggacagcaaagaacgggtcatcaccaaaacccagatccgggacggcaaggcgtac
atcgtctccatcatcccggagcccgccccgtgtgcctccggcggcaccaccgtcggctcg
atcctcaacgcgtgcaacggcggtcagctccaggaccctcagtgggataccaacggcgat
ggtgtggtggatgccaatgacaacagcgcctccggcaaaaaattcgacgacgacatctac
tacgcaccggccatcatcgaagacaaactcttcttcaccaaagaccgggtggagaacacg
acggacgaaatcaaaggcctcttctactggcgcatcaaggaatga
DBGET
integrated database retrieval system
