Desulfoluna limicola: DSLASN_29670
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Entry
DSLASN_29670 CDS
T07859
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dek
Desulfoluna limicola
Pathway
dek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSLASN_29670 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dek03019
]
DSLASN_29670 (groL)
03110 Chaperones and folding catalysts [BR:
dek03110
]
DSLASN_29670 (groL)
03029 Mitochondrial biogenesis [BR:
dek03029
]
DSLASN_29670 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dek04147
]
DSLASN_29670 (groL)
Enzymes [BR:
dek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DSLASN_29670 (groL)
Messenger RNA biogenesis [BR:
dek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DSLASN_29670 (groL)
Chaperones and folding catalysts [BR:
dek03110
]
Heat shock proteins
HSP60 / Chaperonin
DSLASN_29670 (groL)
Mitochondrial biogenesis [BR:
dek03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DSLASN_29670 (groL)
Exosome [BR:
dek04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DSLASN_29670 (groL)
Exosomal proteins of other body fluids (saliva and urine)
DSLASN_29670 (groL)
Exosomal proteins of breast cancer cells
DSLASN_29670 (groL)
Exosomal proteins of colorectal cancer cells
DSLASN_29670 (groL)
Exosomal proteins of bladder cancer cells
DSLASN_29670 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCS97335
LinkDB
All DBs
Position
3743599..3745248
Genome browser
AA seq
549 aa
AA seq
DB search
MAKQIIYDAKAREKMLNGVKTLADAVVVTLGPKGRNVVIDKSWGSPTVTKDGVTVAKEIE
LEDKFENMGAQMVKEVSSKTSDTAGDGTTTATVLARAIYEEGQRLVVAGNNPMSIKRGID
KAIETVVKELVKISKPTKDQNEIAQVGTISANSDTTIGNIIAEAMSKVGKEGVITVEEAK
SMDTTLDVVEGMQFDRGYLSPYFVTETEKMVCSLNDPFILLCEKKVSSMKDLLPILEQVA
KTGKPLLIIAEDVDGEALATLVVNKLRGTLNVSAVKAPGFGDRRKAMLEDIAVLTGGQVI
SEDLGVKLDSITLEDLGKAKSVVIDKDNSTIVDGAGSRTALEARVKMIRAQADESTSEYD
REKLQERLAKLIGGVAVISVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVALVR
CIEALTKVKVKAEEKMGVKVIMRAMEEPLRMIANNAGVEGSVVLEKVKNSDGSFGYNAAS
DTYEDLLEAGVIDPTKVVRLALQNAASVASVMITTEAMIADLPSKDEPAMPAGGGMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacagattatttacgatgcaaaagcacgcgaaaaaatgctcaatggcgtaaaa
acccttgctgacgctgttgtcgtcaccctgggtcccaagggccgcaacgttgtcatcgat
aaatcctggggctcccccacggttaccaaagacggcgtaaccgttgccaaagagatcgaa
ctggaagacaagttcgagaacatgggcgcgcagatggttaaggaagtctcttccaagacc
agcgacaccgccggcgacggcaccaccactgcaactgttctcgctcgagccatctatgag
gaaggccagcgccttgttgtagccggtaacaaccccatgagcatcaagcgcggaatcgac
aaggccattgaaaccgtcgtcaaagagcttgttaaaatctccaagcccaccaaagaccag
aacgaaatcgcccaggtcggaaccatctccgccaacagcgacaccaccatcggcaacatc
attgccgaggccatgagcaaggtcggcaaggaaggcgttatcaccgttgaagaagccaag
tccatggacaccaccctggacgtggtcgagggcatgcagtttgaccgcggctacctctct
ccctacttcgtgaccgaaaccgagaagatggtctgctccctcaacgaccccttcatcctt
ctctgcgagaagaaggtttccagcatgaaagaccttctccccatccttgagcaggttgcc
aaaaccggcaagccccttctcatcattgccgaagatgttgacggcgaagcactggccacc
ctcgtggttaacaagctccgcggcaccctcaacgtctctgccgtcaaagcccccggcttc
ggcgaccgtcgcaaggccatgctggaagacatcgctgttcttaccggcggccaggtcatc
tccgaagacctcggcgtaaagcttgacagcatcaccctcgaagacctcggcaaggccaag
agcgttgtcatcgacaaggacaactccaccatcgttgacggtgccggctcacgcactgcc
ctggaagcccgtgtcaagatgatccgtgcccaggctgatgagtccaccagcgagtacgat
cgtgagaagctccaggagcgcctcgccaagcttatcggcggcgttgccgttatcagtgtc
ggtgctgccaccgaaactgaaatgaaagagaagaaagcccgcgttgaagacgccctgaac
gctacccgagctgctgttgaagagggcatcgtccccggcggcggcgtggctctggttcga
tgcatcgaagccctcaccaaagtaaaagtgaaggccgaagagaagatgggtgtaaaagtg
atcatgcgcgccatggaagagccccttcgcatgatcgccaacaatgccggcgttgaaggt
tctgttgtccttgaaaaagtcaagaacagcgacgggtccttcggctacaacgcagcgtcc
gacacatacgaagacctgcttgaagctggcgtcatcgaccccaccaaagtggttcgtctt
gccctgcagaacgcagcgtccgttgcctctgtcatgatcaccaccgaagccatgatcgca
gatctcccctccaaggacgagcctgccatgcctgccggcggcggcatgggtggcatgggc
ggcatgggcggcatgggcggcatgatgtaa
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