Desulfoluna limicola: DSLASN_34990
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Entry
DSLASN_34990 CDS
T07859
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dek
Desulfoluna limicola
Pathway
dek00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSLASN_34990 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dek01007
]
DSLASN_34990 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dek03016
]
DSLASN_34990 (serS)
Enzymes [BR:
dek01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DSLASN_34990 (serS)
Amino acid related enzymes [BR:
dek01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DSLASN_34990 (serS)
Transfer RNA biogenesis [BR:
dek03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DSLASN_34990 (serS)
Prokaryotic type
DSLASN_34990 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ODAD1_CC
YwqH-like
TPR_MLP1_2
BLOC1_2
TMF_TATA_bd
OVT1
Spectrin
TMPIT
Fzo_mitofusin
Motif
Other DBs
NCBI-ProteinID:
BCS97867
LinkDB
All DBs
Position
4428330..4429604
Genome browser
AA seq
424 aa
AA seq
DB search
MLELKYVRDNLQIVEEALEKRSGKADLATFTTCEAKRREVIGELEGLRYQRNTVSDEIAK
LKKSGENAQPQIDEMKTVSTRIKELEKEANEAEATLQEILMGIPNIPHPSVPMGRDEEDN
TLLRTVGTPTAFPFEPKAHWDIGEDLGILDFGRASRITGARFPLYFGAGARLERALINFM
IDLHTEEHGFSEVLPPFIVNRNSLTGTGQLPKFEEDLFKLEGSEYYLIPTAEVPVTNIHA
GEILSDDDLPIRYVAYTPCFRSEAGSYGKDTRGLIRQHQFNKVEMVKLVDPETSYDELES
LTLSAEKVLQLLDLPYRVVTLCSGDLGFSSAKTYDIEVWMPAQDKYREISSCSNFEDFQA
RRMGIRFRRKDEKKPRLVHTLNGSGLAVGRTVAAILENCQQEDGSVKIPEALVPYMGGKE
VIAR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaactcaagtacgtaagagacaacctccagattgtggaggaagcccttgaaaag
agaagcggcaaagccgacctcgccaccttcaccacgtgtgaagccaagcgccgtgaagtc
atcggagaactcgaaggtctccgctaccagcgaaacaccgtctctgatgagattgcaaag
ctgaaaaaatccggggaaaatgcccagccccagattgatgaaatgaaaacggtctccacc
cggatcaaggagcttgaaaaagaggccaacgaagccgaggccacgcttcaagagatcctc
atggggatccccaacatcccccacccttcggtgcccatgggcagggatgaagaggacaac
acccttcttagaaccgtgggcacccccacggccttcccctttgagcccaaagcccactgg
gacatcggcgaagatcttggaatcctcgatttcggcagggcctcacggatcaccggagcc
cgctttcccctgtacttcggagccggcgcacgcctcgaacgtgccctcatcaacttcatg
attgacctgcacaccgaagaacacggattttctgaggtactgccccccttcatcgtcaac
cggaacagcctgaccggaaccggccaactgccgaaatttgaagaggacctcttcaagctg
gagggcagtgagtactacctgatccccacagcggaggtccctgtcaccaatatccacgcg
ggggagatcctctcggacgacgatctgccgatccgttacgtggcctacaccccctgcttt
cgatccgaggccggttcctacggtaaagatacccgtggcctgatccgacagcaccagttc
aacaaggtggaaatggtcaagctggtggatcccgaaacctcttacgatgagctggaaagc
ctgaccctttccgccgaaaaggtcctgcagcttctggatctgccttaccgggtcgtcacc
ctctgcagcggtgacctcggcttctcctctgccaagacctacgacatcgaggtgtggatg
ccggcccaggacaagtaccgcgaaatctcttcctgcagcaacttcgaagacttccaggcc
cgccgcatgggcatccggttccgacgcaaggatgagaaaaagccacgcctcgtccacaca
ctcaacggctccggcctggctgtgggacgaacggtcgccgccatcctggagaactgtcag
caggaagacggctccgtaaaaattcccgaagcacttgttccctacatgggcggcaaggag
gtaattgccagatga
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