KEGG   Desulfoluna limicola: DSLASN_36020
Entry
DSLASN_36020      CDS       T07859                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dek  Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:dek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dek03016]
    DSLASN_36020 (truB)
Enzymes [BR:dek01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DSLASN_36020 (truB)
Transfer RNA biogenesis [BR:dek03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DSLASN_36020 (truB)
 Prokaryotic type
    DSLASN_36020 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: BCS97970
UniProt: A0ABN6FBM1
LinkDB
Position
complement(4561547..4562452)
AA seq 301 aa
MKDGILLIDKPAGISSASVVYRIKKRFRFKKVGHTGTLDPFATGLMVITIGAATRLSRFF
LDADKQYAARLTLGTLTDTLDPEGEVLTSESAVAMAALEERLGESVITGVLEAFTGDLMQ
VPPIYSALKHNGVPLYKLARKGEAVEKPPRPVTLHKNSLTSFSFPDIDFHVSCSKGTYIR
SLARDMAEALGTVGHLTSLRRIESTGFHVDEALPLAEAEARAFEDLPMIAMSDALSHLPS
FVVDEAERMGVMNGNQLAWRPCGEDAGAAFCRVLDAEGRLIAMVESAKIGEHHKYCCVFN
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaagacggaattttactgatcgataagcctgcggggatttcgtcggcatcggttgtc
taccgcatcaagaagcggtttcgtttcaagaaggtcggccacacgggaaccctggacccc
tttgccaccggtctcatggtgatcaccatcggggccgccacacggctctcccgttttttt
ctcgacgccgataagcagtatgccgcgcgcctcaccctcggcacccttaccgataccctg
gaccccgaaggcgaggtgctcaccagcgaatccgccgtggccatggccgctcttgaagag
cggctcggagagtcggtcatcacgggggtgcttgaggcgtttaccggtgacctcatgcag
gtccctcccatttattcggcactcaagcacaacggggtgcctctctacaagctggcccga
aagggtgaggcggtggagaaaccccctcgccctgtgaccctgcacaaaaacagcctcacc
tcattctcgttccccgatatcgattttcacgtcagctgctccaagggcacctacatccgg
agcctggcccgtgatatggctgaggctttggggaccgtggggcatcttacctcacttcgg
cggattgagagcacggggttccacgtggatgaggcccttccccttgccgaggccgaagcc
agggcctttgaggacctgcccatgatcgccatgtccgatgccctctcccaccttccgtcc
tttgtggtggatgaggcagaacggatgggggtcatgaatgggaaccaacttgcctggcgc
ccctgcggtgaagacgcgggggcggcattttgccgggtcctcgatgccgaaggccgcctg
atagccatggtggagtcggctaaaataggggaacatcacaaatattgttgtgtttttaac
gcatag

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