Desulfoluna limicola: DSLASN_39130
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Entry
DSLASN_39130 CDS
T07859
Name
(GenBank) hypothetical protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dek01011
]
DSLASN_39130
Enzymes [BR:
dek01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DSLASN_39130
Peptidoglycan biosynthesis and degradation proteins [BR:
dek01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DSLASN_39130
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GFIT
Motif
Pfam:
SpoIID
TPR_6
TPR_16
TPR_12
TPR_2
TPR_19
TPR_9
YfiO
TPR_18
TPR_5
Motif
Other DBs
NCBI-ProteinID:
BCS98281
LinkDB
All DBs
Position
complement(4965580..4967148)
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AA seq
522 aa
AA seq
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MIRLKHLITLCLLLCFAPGLSAQTESRSGLFEEASTLLEQGNTLEAAALYRRILEGNSDR
EQRARALLFLSTLYSRNLNLPDTAVACLEQIETTYPDTSVVSDARFALGVVTYRSGRFHQ
AVTHFEGFIELYPDHMRSSSARAWLREAEELAGTKPSVSPQNKAMDQLPDRVRVLIRNDV
EKVLLGKAGDPIAILRDGVPLYEGEGPVAVTVKNKALILNGVVAGSRALAVRSEGLRPRV
DGQAYRGRVTLWPGDKGISVVNTLGIEPYLYGVLPKEMSPLWPEEALKAQAVASRTYTYN
TLLSQKDHPRFDLEASTAFQVYGGADAETPETTRPVDLTRGSYLAFQGLPIIACFHANSG
GMTESADAVWGAALPYLKGVKDSFSRLTPDACWKKELRVDAMVKRLWSKGYRPGGIISLE
TTEHSPSGRIGRVILNTSRGRLELTGNEFRLAMGPTEIKSSRFSATRQGNRYLFEGCGYG
HGVGMSQWGARKMATSGFTYDTILHHYYKNVSLVTIDKGRLR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcctgaaacacctgatcaccctctgccttcttctctgctttgccccgggcctc
tccgcgcaaacagagtcccgttccgggctcttcgaggaggcatccaccctcctcgaacag
ggcaacaccttggaggccgccgctctttaccggcggatcctggagggaaactccgaccgg
gaacaaagagccagggcgctgctttttctctccaccctctacagccgcaacctgaacctg
ccggacacggcggtggcctgcctcgagcagatcgaaaccacctatccggacacgtcggtg
gtctccgacgcccgttttgccttgggggtcgtcacctaccgaagcggtcgctttcatcag
gctgtcacccattttgagggatttattgaactctaccccgaccacatgcgcagctcctcg
gcacgcgcatggctgagggaggcggaggagctggcgggcacgaagccctcggtcagccca
cagaacaaagccatggaccaactgcccgacagggtaagggtcctgattcgaaacgatgtg
gaaaaggtgctcttgggcaaggccggcgaccccatagctatcttgcgggacggggtgccc
ctctatgaaggagagggacctgtggcggtgaccgtaaaaaacaaggcgctgatcctcaac
ggtgtggttgcgggcagccgggccctggcggtccgcagcgaaggcttacgtccccgggta
gacgggcaggcctaccggggcagggtgaccctttggcccggcgacaagggcatctccgtg
gtcaacacccttggcattgagccctacctgtacggtgtactccccaaagagatgagtccc
ctctggcccgaagaggcccttaaagcacaagccgtggcctcacgaacctacacctacaac
accctgctcagccagaaggaccacccccgttttgaccttgaggccagcaccgcctttcag
gtctacggcggagccgatgccgaaacccccgagaccacgcgccctgtggaccttacccgg
ggaagctacctcgcctttcaggggcttcccatcatcgcctgctttcatgccaacagcggc
ggcatgacagagagtgccgatgccgtctggggggccgcccttccctacctgaagggggtc
aaggacagcttcagccgactgacgccggatgcctgctggaaaaaagagctgagggtcgat
gccatggtgaagcggttgtggagcaaggggtatcgcccggggggcatcatctccctggag
acaaccgagcactccccgtcgggacgcatcggccgggtgatcctcaacacctcccgagga
cgcctggagctcaccggcaatgagttcaggcttgccatggggccgacagaaatcaaaagc
tcccgtttttcggccacccgacagggcaaccgctacctctttgaaggatgcgggtatggg
cacggcgtcggcatgagccaatggggagcccgtaaaatggcgacatccggcttcacctac
gacaccattttgcaccactactacaaaaacgtctccctggtcaccattgacaaagggcgg
cttcgctga
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