Desulfoluna limicola: DSLASN_39360
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Entry
DSLASN_39360 CDS
T07859
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dek03016
]
DSLASN_39360
Enzymes [BR:
dek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DSLASN_39360
Transfer RNA biogenesis [BR:
dek03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DSLASN_39360
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
BCS98304
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All DBs
Position
4990852..4991424
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AA seq
190 aa
AA seq
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MGRKTTRRLFLGMPLSDEVRDSLMRDMARLAKLVPERSVGWVPEANLHLTLKFLGEVDEE
RVGRLSIGLSEKCSAWGVMASALHEGVVLFPGARRPRVVAAGVEGGDRLLHLAARLELWA
EKEGFPREKRAFRPHITIGRVRKGGGPFPELSGGRITPLAFALDRVTLYESRLTPKGAQY
IACGSVGLAP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgggccggaaaacaacacggcgcctgtttctggggatgccactttcagatgaggtgcgg
gacagcctgatgcgcgacatggcaaggctggctaagctcgtgcccgaacgatccgttggg
tgggtgccggaagcgaacctccatcttacccttaaatttctgggcgaggtggacgaagag
cgtgtggggcgtctgagcataggcctttctgaaaaatgctcggcatggggcgtcatggcg
tctgccctccatgagggggtggtgctctttcccggtgccaggcgtccgagggtggtggcc
gccggggtggagggtggagaccgtctcctgcacctggctgcacgcctggagctctgggcc
gaaaaagaggggttcccgcgagagaaaagggcgttcaggccccacataacgataggccgt
gttcggaaagggggtggtcccttcccggaactttccgggggccgcatcacccccctcgcc
tttgctttggaccgggtcaccctttatgagagccggctcaccccgaagggtgcgcaatat
atcgcctgcggctctgttggcttggcgccgtga
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