Desulfoluna limicola: DSLASN_39740
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Entry
DSLASN_39740 CDS
T07859
Name
(GenBank) 2-hydroxyglutaryl-CoA dehydratase
Organism
dek
Desulfoluna limicola
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BcrAD_BadFG
DUF2229
HGD-D
FGGY_N
Hydant_A_N
HIGH_NTase1_ass
Motif
Other DBs
NCBI-ProteinID:
BCS98342
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Position
complement(5034865..5038980)
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AA seq
1371 aa
AA seq
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MKAGLDFGSKYIHYAVLDHDRIVTSGSTIHNGNLEGALEQVRDALESETDGAITHFGVTG
NIALTDIRVFDPVIASVEAATLLKASCRNLLSIGCESFYLIRLDEEGNYVEHVVNSDCAS
GTGSFIDQQAERLGFSTENLAEKAAAFDGKTPSIATRCAVFAKSDIIHAQAQGYSKEAIA
TGLCEGVARSVLANTVRGRELSGDLLFIGGMAANTKIVREVEAALGLKVTVPDGAQSVNA
IGAASLADQPWESSKLLISSMGRQRTVRPALDTDMPHYPMFEGITSYEADGVEVTLYQTP
ATNGEVYIGIDVGSTSTKAVITDKGGDILAGLYGRTQGDPVDAVTRLFAQIKELFKEVSF
TVCGVATTGSGRELIKEVVGADLALNEITAHAKGATFLDPEVDTIIEIGGQDSKFTLLNE
GVVKHAVMNYVCAAGTGSFIEEQAKRLHMTLPEISDIVEGAEAPFTSDRCTVYMERDLNI
FLSEGWKKAEIMSAVLHSVRDNYLSKVVGKSTAGKRVYFQGATARNKALVACFERELGQE
VLVSKFCHLTGALGCAVALKESGIEASTFTGIDFSCAIDTELCELCSNKCELRIYTVGEK
KSAWGLKCGRDYAAKKVGGKETTSSLEKRFKATFNTEDQNHEGRKTIGIPETLFMVEYTP
LFKDLFQRLGLNVVVEKSTAGKLAHGMKLINADFCTPMALTHGMVAALDKKEVDFIFLPS
LISEQNLLERLPMEEAFGAKATDSYFCYYSSYAATIINNLPGMEFGGRLLHPTIRMNNVA
DEIIGERLAADLAEVLEVSEEAIVHAFVDAKKAFTEKTKNWVSEGTKQLSEAGEKPKILL
LGRPYALFDKRVNLGIPARLESMGYDIVSQSMMDLEANPNDLPDHLSNMHWYFGQQILLA
LDAVRKNPDLYPVFLTCFRCSPDAYLMNHIKDAMEKMGKPYLILQLDEHGSDVGYLTRIE
AAIDTFVADHDRRKESTEEIKIPRTAFAPDTPAEGDTVLIPMVDARINRLQAEVFKAAGY
KAEVLPVENESLNLGYRFASGGECLPNVAIVGSVVSRLSKGDLDPDKAIVYLPNICLSCN
FNQYANLVKSSCDKAGLSGVKVMNTNGQAAVPGISARHNAQLLSVTILSSILSKLRFRFL
PYETEEGATLSAVDEAETIIAWHIQNRKSLMTAADKVRELFDTLPLPTTRKPRIGILGDM
YAKYNEVLNEAICDHTEALGGEVLLPSYNELVVHSIFADTRQNDTGEKLLSTMVGYEEKF
EAIFEGLLEGVTEPPLDECQELMEEFGLTSFIAGETAVSLGRMLYYIKHGLVSAVIHVNP
VFCCPGVISASIFRKIQETYGVPVIDLFYDGTNKPNRMIDPHMFYLTRKAG
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaggactcgatttcggctccaaatatattcactatgccgttctggaccacgac
cggatcgtgaccagcggcagcaccatccacaacggaaacctggaaggggcccttgagcag
gtcagggacgccctggaatccgaaacagacggagccatcacccacttcggggtgaccggt
aacatcgccctgaccgacatccgggtgttcgaccctgtgattgcctcggttgaggctgcc
accctgctcaaggcctcctgccgcaacctcctttccatcggctgcgaaagcttttacctc
atccgcctggatgaggagggcaactacgtggagcacgtggtcaactccgactgcgcctca
ggcaccggctccttcatcgaccagcaggccgagcgactcggcttctccacggaaaacctg
gcggaaaaagccgccgcctttgacggaaaaaccccctccattgccacccgctgcgccgtc
tttgcaaaaagcgacatcatccatgcccaagcgcaggggtactccaaagaggccatcgcc
actggcctttgtgaaggggtggcccgaagcgtcctggccaacacggtcaggggccgggaa
ctctcaggggaccttctctttatcggaggcatggcagccaacaccaagatcgtccgagaa
gtggaggcggccctgggactaaaggttaccgtgcctgacggcgcacagagcgtaaacgcc
atcggtgccgcatccctggccgaccagccctgggagtcaagcaaactcctcatctccagc
atgggacgccaacgaacggtccgccccgccctggataccgacatgccccactaccccatg
tttgaaggcatcaccagctacgaagccgacggtgtggaggtgaccctctaccagacgccc
gcaacaaacggtgaggtctatatcggtatcgacgtgggctccaccagcaccaaggcggtc
atcaccgacaaaggcggcgatatcctggcgggcctctacggccgcacccagggcgacccc
gtggatgccgtcacccgcctgttcgcacagatcaaagagctctttaaagaggtgagcttc
accgtttgcggcgtggccaccaccggctccggccgggagctgatcaaagaggtggtgggg
gcagaccttgccttaaacgaaatcaccgcccacgccaagggtgccaccttcctcgatccc
gaggtggacaccatcatcgaaataggcggccaggactccaaattcaccctcctcaacgaa
ggggtggtgaagcacgccgtcatgaactacgtctgtgcggcggggaccggctcctttatc
gaggagcaggccaagcgccttcacatgaccctgcccgaaatctcagatatcgtggagggt
gcggaggccccctttacctcggaccgttgcaccgtctacatggaacgggacctcaacatc
ttcctctcggaaggatggaaaaaagcggagatcatgtctgcggtccttcacagtgtccgg
gacaactacctctccaaggtggtgggcaaaagcaccgccggcaagcgtgtctacttccag
ggcgccacggcccgaaacaaggccctggtggcctgctttgagcgggagctgggccaggag
gtcctcgtctccaaattctgccacctcacaggtgccctgggctgcgccgtggccctgaag
gagtcgggcattgaggcatccacattcacgggcatcgatttctcctgcgccatcgatacc
gaactctgcgagctctgcagcaacaaatgcgagctgcgcatctacaccgtgggcgagaag
aagagcgcctggggcctgaaatgcggcagggactacgcggccaaaaaggtgggcggcaaa
gagaccacctcctcccttgaaaaacgatttaaagccacgttcaacaccgaggaccagaac
cacgagggccggaagaccatcggcattcccgagaccctcttcatggtggagtacaccccc
ctcttcaaggacctcttccagcgcctcggcctcaacgtcgtggtggaaaagagcacggcg
ggcaaactcgcccacggcatgaagctcatcaacgcggacttctgcacccccatggccctc
acccacggcatggtggccgccctggacaagaaagaggtggatttcatcttcctgcccagc
ctcatcagcgagcagaacctcctggaacggcttcccatggaagaggccttcggcgccaaa
gccacggacagctacttctgctactactcctcctatgcggccaccatcatcaacaacctt
cccggcatggagttcggcggccgccttctccaccccaccatccgcatgaacaacgtggcc
gatgagatcatcggggagagactggcggcagaccttgccgaggtcctggaggtttcggaa
gaggccattgtccacgcctttgtcgatgccaaaaaggccttcaccgaaaaaacaaagaac
tgggtctccgaaggaaccaagcagctttcagaagcaggggagaagcccaaaatccttctc
ctgggtcgcccctacgccctgtttgacaaacgggtcaacttaggcatccccgcacggctg
gagtccatggggtatgacatcgtctcccagtccatgatggaccttgaggcgaaccccaat
gacctgcccgaccacctgtccaacatgcactggtacttcggccagcagatccttctcgcc
ctggatgccgtgcgtaaaaaccccgacctctacccggtctttctcacctgcttccgctgc
agcccggacgcctacctgatgaaccacatcaaggacgccatggagaagatggggaaaccc
tacctcattctccagctggacgagcacggcagcgacgtgggctacctcacccgcatcgaa
gcggccatcgacacctttgtggccgaccacgaccgaagaaaagagagcactgaggagatc
aaaattccccgcacggcctttgcaccggacaccccggctgagggggacaccgttctcatc
cccatggtggacgcacgcatcaaccgtctccaggccgaggtgttcaaggccgccggctac
aaggcggaggtgctccccgtggagaacgagtccctcaacctcgggtaccgctttgccagc
ggcggagagtgcctgcccaacgttgccatcgtgggttccgtggtctcgcgcctctccaaa
ggggatctcgacccggacaaggccatcgtctacctgcccaacatctgcctctcctgcaac
ttcaaccagtacgccaacctggtgaagtcctcctgcgacaaagcaggcctttcaggggtc
aaggtgatgaacaccaacggacaggccgcggtgcccgggatctccgcccgacacaacgcc
cagctgctgtcggtgaccatcctgagttccatcctctccaagctgcgcttccggttcctc
ccctacgaaactgaggagggagccaccttaagcgctgtggatgaggcagaaaccatcatc
gcctggcacatccaaaaccgaaaatctctcatgaccgcagcggacaaggtgcgcgaactc
ttcgacaccctccccctgccgaccacgagaaaaccccgcatcgggattctcggggacatg
tacgccaagtacaacgaggtcctcaacgaggccatctgcgatcacaccgaagccctgggc
ggggaagtgctgctcccctcctacaacgagctggtggtccactccatctttgcggacacc
cgtcagaacgacaccggagagaaactcctctccaccatggtcggctacgaggaaaagttc
gaagccatcttcgaagggctcctcgaaggggtcaccgaaccgcccctcgacgaatgccag
gagctcatggaagagttcggcctcaccagcttcatcgctggggaaacagccgtctccctc
ggccgcatgctctactacatcaaacacggcctcgtctccgccgtcatccacgtcaacccg
gtcttctgctgcccgggggtcatcagcgcctccatcttccgcaaaatccaggagacctac
ggcgtgcccgtcatcgacctcttctacgacggcaccaacaaacccaaccgcatgatcgac
ccgcacatgttctacctgacgcggaaggcaggatag
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