Desulfoluna limicola: DSLASN_40980 Help Entry DSLASN_40980      CDS       T07859                                  Name (GenBank) hypothetical protein   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism dek  Desulfoluna limicola Pathway dek03020   RNA polymerase Brite KEGG Orthology (KO) [BR:dek00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     DSLASN_40980  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dek03021]     DSLASN_40980    03400 DNA repair and recombination proteins [BR:dek03400]     DSLASN_40980 Enzymes [BR:dek01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      DSLASN_40980 Transcription machinery [BR:dek03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      DSLASN_40980 DNA repair and recombination proteins [BR:dek03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       DSLASN_40980 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Rotamase Rotamase_3 Apocytochr_F_C Rotamase_2 RnfC_N RPOC_hybrid Motif Other DBs NCBI-ProteinID:  BCS98466 LinkDB All DBs Position 5193640..5198076 Genome browser AA seq 1478 aa AA seqDB search METLYDFFAKPIDPKMYSGVKIALASPEQISQWSHGEIKKPETINYRTFKPERDGLFCAK IFGPTKDYECNCGKYKRMKHRGVVCEKCGVEVIQSKVRRERLAHIELATPVAHIWFLKSL PSKIGNLLDITLKNMEKVLYFDSYIVMDPKETGLTKYQLLSDDKYIEAIDLYGKDAFEVG IGAEAVGKLLSELNLDQIYNDLREELKTTTSLAKKQKLSKRLKIVDAFYNSGVDPVWMIM SVIPILPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLSRLMELKAPDIIVRNEKRML QESVDVLFDNGRHGRVVTGTNKRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRTVIVVGP NLRLHQCGLPKKMALELFKPYVYHRLEKKGLVSTVKSAKKMVEREVPEVWDTLDEVVKEY PVMLNRAPTLHRLGIQAFEPVLVEGKALQLHPLVCTAFNADFDGDQMAVHLPLSIEAQVE ARVLMLASNNTLSPANGQPVIIPTQDIVLGLYYISRQVAGARGEGTILGSMDEVRIAYDH GKLGLHAAIKVRMGDKLMETTVGRTLLWDIIPSLPELCFRHILVKDRGKAEEIHQAMTSG TSFEELLPRSESSDRKRGGEIGYIDHEEMRKVFRLNDDTLDELFAMEVGDFSAVTETSGG YHIFYVSSKRPGVPFAMINKVMDKKASRDLIDFAYRYISPKATVLLADRLKDLGYRFSTI GGLSISIDDMVIPGNKWDIMHESEDKVVEINRQYAEGLITQGEKYNKVVDIWAKATDDIA NAMMDTMSEPKVPVASPVKDEPDIRLDSRNIDNINSIFMMADSGARGSKDQMRQLAGMRG LMAKPSGEIIETPIQANFREGLSVLQYFVSTHGARKGLADTALKTANSGYLTRRLADVAQ DCAVIEPNCGTTMGIEVEALMEGGEVIQRLGERILGRTTLENVYDPFTDEVLVSEGVEID EKILSVIEEAGITSLKIRSVLTCMTRGGVCAKCYGRDLSHGDTVEIGQAVGILAAQSIGE PGTQLTMRTFHIGGTASRKVEVAEIKARVEGNIKFLDDLKVVKNETGEFIVMNRRGGEFS IVSDTGREREKHHVIYGAHLLVNDGAVVDNGQLLASWDPFTVPIITEVSGKVKFGDIESG KTMQEKLDPVTGKSSRTIIESRLGDARPRISVKDEANKTVQLGGGALARYSLPVEAVILV EEHDEVKAGDILAKLPRATTKTKDITGGLPRVAELFEVRKPKETAVLTQIDGYVSISKGT KGKQKVTVTNADANEKREYLIPKGRHINVYEGDYVRAGEKLTGGSENPQDILNIKGEVAL ASYLVDEVQQVYRLQGVRINDKHIEVIVRQMMKRVKVTDSGDSTFIMEEHVDRTDFADAN RRLVEEGAQPSQGEPLILGITKASLSTDSFISAASFQETTKVLTEAGIRGKVDTLRGLKE NVIMGRLIPAGTGIAQYRNIEVESEQEEVLEETNVIDL NT seq 4437 nt NT seq  +upstreamnt  +downstreamnt ttggaaaccctatacgattttttcgccaagccgatagatcccaagatgtactccggcgta aagattgctctggcgtctcccgagcagatctcgcagtggtctcatggggagatcaagaag ccggagacgatcaactaccggacgttcaagcctgaacgagacggcttgttctgtgccaag atctttggccccaccaaggactatgagtgcaattgcggcaagtacaagcgcatgaagcac cgcggtgtggtgtgcgagaagtgtggcgtcgaggttattcagtccaaggtgcgtcgtgag cgcctggcccacattgaactggccacccctgtggcccatatctggttcctgaagagtctg cccagcaagatcggcaaccttctggacatcaccctgaaaaacatggagaaggtcctctac tttgacagctacatcgtcatggaccccaaggagactgggctcaccaagtaccagctcctc tccgatgacaaatatatcgaggccatcgacctctacggcaaagacgcctttgaggtcggt atcggtgccgaggcggtgggcaagcttctctctgagctcaaccttgaccagatctacaac gacctgcgtgaagagctgaagaccaccacgtcccttgccaagaagcagaagctcagcaag cgcctcaagattgtcgacgcgttttacaactccggtgtggaccccgtctggatgatcatg agtgtcattccgattcttcctccggacctgcgtccccttgttcccctggagggcggccgg tttgccacctccgacctgaacgacctttaccgtcgtgtcatcaaccggaacaaccgattg agccgcctgatggagctcaaggctccggacatcattgtccgaaacgaaaagcggatgctc caggagtctgtggacgtcctctttgacaacggccgtcacggccgtgtggtcaccggcacc aacaagcgtcccttgaaatctctttccgataccctcaagggcaagcagggccgtttccgt cagaaccttctcggaaagcgagtcgactactccggccgtaccgttattgttgtcggcccc aacctgcgcctgcaccagtgcggccttcccaagaagatggccctggagttgttcaagccc tatgtgtaccaccgtcttgagaagaaagggctcgtctccacagtcaagagcgccaagaag atggtggagcgcgaagtccccgaggtgtgggacaccctggatgaggtggttaaggagtac ccggtgatgctgaaccgtgctcccacccttcaccgcctgggtatccaggcctttgagccg gtgcttgtggaaggcaaggcccttcagctgcaccctctggtctgtacggccttcaacgcc gactttgacggtgaccagatggctgttcacctgccgctttccatcgaagcccaggtggag gcccgcgtactcatgctggcttccaacaacaccctctcgcccgccaacggccagccggtg attatccctacccaggacatcgttcttgggctctattatatctcccgccaggtggccggt gcccgcggggaggggacgatcctcggcagcatggacgaggtccgtattgcgtatgaccat gggaagctcgggctccacgccgccatcaaggtgcgcatgggcgacaagctgatggagacc accgtcgggcggaccctcctctgggacatcattccctcgctccctgagctctgcttccgc cacattcttgtgaaggatcgcgggaaggcagaggagatccatcaggcgatgacctccggc acctcttttgaagagctgcttccccgttccgagagttcagaccggaaacgaggcggtgag atcgggtacatcgaccacgaagagatgcgcaaggtgttccgtctcaatgacgataccctt gacgagctctttgccatggaggtgggggatttcagtgcggtgaccgaaacctcaggtggt taccacatcttctacgtctccagcaagcgacccggggtgccctttgccatgatcaacaag gtgatggacaaaaaggcgagccgggacctcatcgactttgcataccgctacatcagcccc aaggcgaccgtgcttctggccgaccgcctgaaggacctggggtatcgcttctcaaccatc ggcggcctctccatctccatcgacgacatggtgattcccggcaacaagtgggacatcatg cacgagtccgaggacaaggtggtcgagatcaaccgccagtatgccgaaggtctgattacc cagggcgagaagtacaacaaggtggtggatatctgggccaaggccacagacgacatcgcc aacgccatgatggacaccatgagtgagcccaaggtaccggtggcctctcctgtcaaggac gagcccgatatccgcctggactcccggaacatcgacaacatcaactccatctttatgatg gccgactccggcgcccgaggctcgaaagaccagatgcgtcagttggccggcatgcgtggc ctgatggccaagccgtccggtgagattatcgaaacgcccatccaggcaaacttccgtgaa ggcctttcggttcttcagtacttcgtctctacccacggcgcccgtaagggtctggcggat acggcccttaaaacagccaactccggttacctgacccgacgccttgccgacgtggcccag gattgcgccgttattgagcccaactgtgggaccaccatgggtatcgaggtggaggctctc atggagggtggcgaggtcattcaacgccttggtgagcgtatcctcggtcggacgaccctg gaaaacgtttacgacccctttaccgatgaggtcctcgtgtccgagggggttgagatcgac gaaaagatcctctccgttatcgaagaggcgggcatcaccagcctcaagattcgctcggtc ctcacctgcatgacccgcgggggcgtgtgtgccaagtgttacggtcgtgacctgtcccat ggcgataccgtggagatcggtcaggcggtgggtattctggctgcccagtccatcggtgag cccgggacccagctgaccatgcgtaccttccacatcggcggtacagccagccgaaaggtc gaggttgccgaaatcaaggcgcgtgttgagggcaacatcaagtttctcgacgacctgaag gttgtaaagaacgaaaccggagagttcattgtcatgaacaggcgcggtggcgagttctcc atcgtcagcgacaccggccgtgagcgtgaaaagcaccacgtcatttacggcgcccacctt ctggttaatgatggggctgtggtcgacaacggccagctccttgcctcctgggaccccttt accgtgcccattatcaccgaggtctccggtaaggtgaagttcggagacatcgaatccggc aagaccatgcaggagaagctggaccccgtcaccggcaagtccagccgaaccatcattgag agccgtttgggtgatgcccgtccccgtatttcagtcaaggacgaggccaacaagaccgtt cagcttggtggcggcgccctggcccggtactccctgcccgtagaggcggttatcctggtt gaggagcacgatgaggtcaaggcaggagacattctcgccaagctcccccgtgccaccacc aaaaccaaggatatcaccggtggtctgcctcgtgtggccgagctctttgaggttcggaag cccaaggagaccgcggtgctgacccagattgacgggtatgtgtccatctccaaggggacc aagggcaagcaaaaggttacggtaaccaacgccgatgcaaacgagaagcgtgaatacctt atcccgaagggccgtcacatcaacgtgtacgagggggactacgtccgtgccggtgagaaa ctgaccggtggcagcgaaaacccccaggatatcctcaacatcaagggcgaggtggctctg gccagctaccttgtggatgaggttcagcaggtgtatcgtctccagggtgtgcgcatcaac gacaagcacatcgaggtgatcgtccgtcagatgatgaagcgcgtgaaggtcaccgattcc ggggactccacctttatcatggaagagcatgtggatcgcaccgactttgccgatgccaac cgcaggcttgtggaggagggcgctcagccctcacagggtgaacccttgattctgggtatc accaaggcctccctttcaacggacagcttcatttcggcggcctccttccaggagaccacc aaggtgcttaccgaagccggtattcgcggtaaagtggacaccttgcgcggcctgaaagag aacgtgatcatgggccgtctgattccggccggtaccggcatcgctcaataccgcaacatt gaggttgaaagcgagcaggaagaggtgttggaagagaccaatgtgatcgacctttag

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