Desulfoluna limicola: DSLASN_41280
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Entry
DSLASN_41280 CDS
T07859
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dek
Desulfoluna limicola
Pathway
dek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSLASN_41280 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dek03021
]
DSLASN_41280 (rpoA)
03400 DNA repair and recombination proteins [BR:
dek03400
]
DSLASN_41280 (rpoA)
Enzymes [BR:
dek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSLASN_41280 (rpoA)
Transcription machinery [BR:
dek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DSLASN_41280 (rpoA)
DNA repair and recombination proteins [BR:
dek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DSLASN_41280 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BCS98496
UniProt:
A0ABN6F9X6
LinkDB
All DBs
Position
5213283..5214302
Genome browser
AA seq
339 aa
AA seq
DB search
MTSNEMIYMNWHEMICPDKVLLSGSSTYGKFVCEPLERGYGITIGNALRRIILSSLYGAG
VVSVKIEDVLHEFSPIPGVLEDVSELILNIKELKLKVNDTETRTLELKAEGPCNVCAGDL
ISPDGRVEILNPDLHLATINEGGKLNVSLTVKVGRGYALARDNKDEDAPVGTIAIDTVFS
PIKKVNYTVSNSRVGQKTDYDKLTLEVWTDGSLVPEDAVAYAAKILKEQMNPFINFDEDI
EPEHDSVSEEGGDRDFNENLYRNVDELELSVRSANCLKNADIIKIYQLVQKTEAEMLKTK
NFGRKSLNEIKEVLTEMGLSLGMKLDGFSPKEEDGAEGE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaacgaaatgatatacatgaactggcatgagatgatctgccccgacaaagtt
cttttgtccggcagttcaacttacggcaagtttgtatgtgaacctcttgaaaggggatat
ggtattaccattggtaatgctctccggaggatcatcctttcatccctctacggtgcaggt
gttgtttccgttaagattgaggatgttctgcatgagttctccccaatccccggggttctt
gaggatgtctctgagctcattctcaacatcaaagagctcaagctgaaggtgaatgacacc
gaaacgcgtacactggagctgaaggccgaaggcccctgcaatgtgtgtgcgggcgacctc
atcagtcccgacggtcgggtggagatcctgaatccggatctgcatcttgctaccatcaac
gagggtggcaagcttaacgtgagccttaccgtaaaggtgggtcgcggatatgccctggcc
agggacaacaaagatgaagacgcacccgttggtaccattgccatcgataccgtcttttct
cccatcaaaaaggtcaactacacggtatcaaactcccgtgtgggtcagaagaccgactac
gacaagttgacccttgaggtgtggacagacggcagccttgttcctgaggatgcagtggct
tatgccgcaaagattctcaaggagcagatgaatcctttcatcaactttgatgaggatatt
gagcctgagcacgacagcgtcagtgaagagggcggcgacagagatttcaacgagaacctc
tacagaaatgtggatgagctcgaactctcggttcgaagtgccaactgcctgaaaaatgcc
gatatcatcaagatttatcagctcgttcagaaaactgaagccgaaatgctcaaaaccaag
aacttcggtcgaaaatctctgaacgagatcaaagaggtcttgactgagatggggctttcc
cttggaatgaaacttgatggtttcagtccgaaagaggaagacggagctgaaggggagtaa
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