Desulfoluna limicola: DSLASN_41780
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Entry
DSLASN_41780 CDS
T07859
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dek
Desulfoluna limicola
Pathway
dek00550
Peptidoglycan biosynthesis
dek01100
Metabolic pathways
dek01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSLASN_41780 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSLASN_41780 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dek01011
]
DSLASN_41780 (mrdA)
Enzymes [BR:
dek01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DSLASN_41780 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dek01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DSLASN_41780 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BCS98546
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Position
5264647..5266476
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AA seq
609 aa
AA seq
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MSSYLNSPDGDWFNRRLKGTMVLIFIAFAVILVRLFYLQIINGQTYRELSTNNRIRLQSI
PPSRGLIYDNEGNLLVDNRPAFDLFIVPRDAKPLSETLERLSSLTGIPAEEMAERITKKG
GENSSRQVVLKRGIGRDVLAPVEVHSFDLPGVVVKVRPKRFYLNPGMAAHLLGYLGEINA
REISSGKHPEASVGDFIGKFGAEKVMEPLLRGSQGGRQVEVDARGRVIRELKRVEADPGK
NIFLTINTKLQKRSEALLKGDVGAVVALDPGTGAVLAMASSPTFDQNDFVSGLSYAKWNA
LRNDPGRPMENKATQALYPPASIYKIVSSIAGLEEKVVDERTHFFCSGRHSFGNRVYRCW
KRIGHGSVDVVDSIAQSCDVYYYEVGERLGVDRLAFYARACGLGRPTGVELAGEASGLIP
TAEWKRRKLGQNWLSGETLSLAIGQSYNLVTPIQMAMLAASVGNGGTLYKPYILGKIETA
DGVLVKKTQPVEKGRLPAGKKTLELVRKGLWGTVNFRKGTGKIAAIEGVTVAGKSGTAQV
ISKGDDEPKKKSIRKFRDHAWFVAYAPVVNPTIAVAVIVEHGEGGSTKAAPIARKVIETY
LGKGEGARD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctatctcaacagcccggatggggactggttcaaccgccgtcttaaagggacg
atggttcttatcttcatcgcctttgccgtgatcctggttcgtctcttttatcttcagatc
attaacgggcagacctaccgggagctttccaccaacaaccgcatccgccttcagagcatc
cctccttcccgggggttgatttatgacaacgagggcaaccttcttgtggacaaccgccct
gcctttgacctgtttattgttccccgggatgccaagcccctgtcggagaccctggaacgc
ctctcttcgctcaccgggattcccgcagaagagatggccgagcggataaccaaaaaagga
ggggagaacagctcccgccaggttgttctcaaacggggcatcgggcgcgacgtcctggca
cctgtggaggtgcacagttttgatctgccgggggtggtggtgaaggtccgccccaagcgg
ttctacctcaacccgggtatggcggcccatctgttgggttatttgggcgagatcaatgcc
cgcgagatctcaagcggcaagcacccggaagcctcggtgggtgattttatcggcaagttc
ggggcggagaaggtgatggagcctcttttgcgtggctctcagggcggtcgtcaggtggag
gtggacgcccgtggacgggtgattcgtgagctcaagcgggtggaggcggaccccggtaag
aatatttttcttacgatcaacacgaagctccagaaaaggtcggaagccctgcttaaaggg
gatgtcggcgctgtggtggcccttgacccgggaaccggcgcagttctggccatggccagc
agccccacctttgaccagaacgattttgtgagcgggctctcctatgccaaatggaatgcc
ctcagaaacgatcccggtcggcccatggagaacaaggcgacccaagccctctaccccccg
gcttccatatataagattgtctcatccattgctggtctggaggagaaggtggtggacgaa
cggacccattttttctgttccgggaggcactccttcgggaaccgggtctaccggtgctgg
aagcggatcggtcacgggtctgtggatgtggtggactccatagcccaatcctgcgatgtc
tattactatgaggtgggggaacggcttggggtggatcgtctcgccttttatgcccgtgcc
tgtgggctggggcgcccgacaggggttgaactcgccggtgaagcgtccggccttattccc
accgcggaatggaagaggcgcaagctgggccagaactggctcagcggggagaccctttcc
cttgccatcggccagagttacaaccttgtgacacccattcaaatggccatgctcgctgct
tcggttggcaatgggggcacgctttacaagccctatatcctggggaaaatagagacggcg
gacggcgtgttggtcaaaaagacccaaccggttgagaaggggcggctcccagcggggaag
aaaacgctggagctggttcgaaaggggctctgggggacggtaaattttcggaagggcacg
ggaaagattgctgccatcgagggcgtgactgtggctggaaagagcggcacggcccaggtg
atcagcaagggggatgatgagccaaagaagaagagcatcagaaaatttcgagaccacgcc
tggtttgtggcctatgcacctgtggtgaaccccaccatcgctgtggcggtgatcgtggaa
catggcgagggagggtccaccaaggcggctcccattgccaggaaagtgatcgagacctat
ctgggaaaaggggagggcgcccgtgattga
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