Desulfoluna limicola: DSLASN_44400
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Entry
DSLASN_44400 CDS
T07859
Symbol
rluD
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dek
Desulfoluna limicola
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dek03009
]
DSLASN_44400 (rluD)
Enzymes [BR:
dek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DSLASN_44400 (rluD)
Ribosome biogenesis [BR:
dek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSLASN_44400 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Pectate_lyase22
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BCS98808
LinkDB
All DBs
Position
5625015..5625956
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AA seq
313 aa
AA seq
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MTVTTEDHGRRLDLFVADKGLVLSRSQASHFIKHGHITVDGEVKKPKHKVREGESVAAVL
PEVKPLDLAPEAIDLEIIHADDDLVVVNKQRGLVVHPAAGHESGTLVNAMLHHFPHMEGI
CGELRPGIVHRLDKDTTGLIVVALNQKTLLELTRQFKAREVKKRYRALVFGAVSHERGII
DQPIGRDPRDRKRMGVNSPVGRASETHYTVADRYPGATLLDVDLKTGRTHQIRVHTHWLG
HPVVGDPVYTRRKADRDLPQSAPLRAVIRQLSGQLLHAHTLAFDHPGTGDRMEFTAPLPD
DFTEVLALLGASE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtaaccaccgaagatcacggacggcgccttgatctgtttgtggcggataaaggc
ctggttctttcacggagccaggcttctcactttatcaagcatggtcacatcaccgtggac
ggtgaggtcaaaaagcccaagcacaaggtccgtgagggggagtctgtggcggcggttctg
cccgaagtgaagccccttgaccttgcgcccgaagccattgaccttgagatcattcatgcc
gatgatgacctcgtggtggtcaacaagcagcgggggcttgtggtgcatcccgctgccggc
catgaatccggaaccctggtcaacgccatgctgcaccattttccccacatggaagggatc
tgtggcgagctccggcccgggattgtgcatcggctggacaaagacaccacagggctgatc
gtggtggccctgaaccagaaaacactccttgaacttacgcggcagtttaaagcgcgtgag
gtgaaaaagcggtaccgcgccctggtttttggggccgtttcccatgagcggggcatcatc
gaccagcccatcggcagagacccgcgggaccgcaagcgcatgggggtcaactcccctgtg
ggaagggcctcggagacccactacaccgtggccgatcgctatccaggtgccacccttttg
gatgtggatctgaaaacgggccggactcatcagattcgggtgcacacgcattggcttggt
caccctgtggtgggggatcctgtctacacccggcgaaaggcggacagggatctccctcag
tcggcccccctaagggcggtgatccggcaactctccggacaactcctccatgcccatacc
cttgcctttgaccaccccggtacgggcgacaggatggagtttacggccccgttgccggat
gactttaccgaggttttggctcttttgggtgccagtgaatga
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