Desulfoluna limicola: DSLASN_49530
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Entry
DSLASN_49530 CDS
T07859
Symbol
rfaF
Name
(GenBank) ADP-heptosyltransferase
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
dek
Desulfoluna limicola
Pathway
dek00540
Lipopolysaccharide biosynthesis
dek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DSLASN_49530 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dek01005
]
DSLASN_49530 (rfaF)
Enzymes [BR:
dek01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
DSLASN_49530 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
dek01005
]
Core region
DSLASN_49530 (rfaF)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
BCS99321
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All DBs
Position
complement(6233139..6234149)
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AA seq
336 aa
AA seq
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MKILIVQTSFLGDTILSTPVIEGLKTLYPDAELWMMTTPLSSGLVKHDPLLSGVIPFDKR
GSAKGIKGLRAMATTIKSMGFHRVYSLHRSIRTSVMLALAGIPERFGFSNAKGRFLYHRT
FHRNPEVHDVLRNLAILDGEADISSIKADMRLFPPPDDIISDAVKTTIPEEPFALMVPGS
AWKTKMWHSEGYRNVAEALIAKGLSVVVAGGPDESEACRIASEGLPAINLAGKTGIGEMV
WVAKRAQVIICNDSMALHMASALKVPNVAIFCSTIPAFGFGPWKNRAIVVEKELSCRPCG
RHGKRECPEGTESCMRDITPEQVVGAVETLLEGDLP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgatcgttcaaaccagcttcctcggcgacaccatcctctcaaccccggtc
attgaaggactcaagaccctttatcccgatgccgaactctggatgatgaccaccccccta
tcaagcggcctcgtcaagcacgaccctctgctttcaggggtcattccctttgacaaacgg
ggcagtgccaaagggatcaaaggccttcgagccatggccaccaccataaaatccatgggg
tttcaccgggtctattccctgcatcggtccatccgaaccagcgtcatgctggccctggcc
ggaatccccgaacggttcggcttttcaaatgccaaagggcgttttctctatcatcgcaca
ttccaccgcaaccctgaagtgcatgatgtccttcgaaacctcgccatcctcgatggcgaa
gccgacatatcctctataaaagcagacatgcgactcttcccgcccccggatgacatcatt
tccgatgcggtaaaaacaacaatacccgaagagccctttgccctcatggttcccggaagc
gcgtggaaaaccaagatgtggcactctgaagggtatcgcaacgtggccgaggcactcatt
gccaaaggtctttctgtggtggttgccggagggcccgatgaatcggaagcctgtcgcatc
gcgtccgaggggctccctgccatcaacctcgccggaaagactggcatcggggagatggtc
tgggtcgcaaaacgcgcacaggtgatcatctgcaatgacagcatggccctccatatggct
tcggccctcaaggtccccaacgtggcgatcttctgctccaccatccccgcctttggcttt
ggcccgtggaaaaacagagccattgtggtggaaaaagaactttcctgccgtccctgtggc
cgccatggcaaacgggagtgccccgaaggcacggagtcctgcatgcgggacatcaccccg
gagcaggtagtgggtgcggtggaaactctccttgaaggcgacctcccatga
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