Delftia sp. Cs1-4: DelCs14_0352
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Entry
DelCs14_0352 CDS
T01497
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
del
Delftia sp. Cs1-4
Pathway
del03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
del00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DelCs14_0352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
del03400
]
DelCs14_0352
Enzymes [BR:
del01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DelCs14_0352
DNA repair and recombination proteins [BR:
del03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DelCs14_0352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5648
Motif
Other DBs
NCBI-ProteinID:
AEF87392
LinkDB
All DBs
Position
complement(390245..391048)
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AA seq
267 aa
AA seq
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MFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFHY
AEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPARKLSIISAYFPSGSSG
ELRQTAKFRFLAEMHDHLMRMKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFTPEERE
WMTKLLHKTDPTGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPATAA
LARTEHIYKDVKFSDHAPVTIGYDMKV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattgaccagcctcaacctcaacggcatccgctcggcctcgaccaagggcgtc
gaagcctggatcgaggccactgcgccggattgtatttgcgtgcaggaaatcaaggcccag
gccgccgacatgaccggacgcttcgagctgctggccggcctgcgcggccacttccactac
gccgagaagaaaggctactcgggcgtgggcgtctacagccgccacgagcccagcgatgtc
gtggtcggcttcggctcgcacgagttcgacgccgagggccgctatgtggaggcgcgcttc
gacacgcccgcgcgcaagctgtccatcatcagcgcctactttcccagcggcagctcgggc
gaactgcgccagacggccaagttccgcttcctggccgaaatgcacgatcacctgatgcgc
atgaagggcgagcgcgagttcatcctgtgcggcgacatcaacatcgcccaccagcagatc
gacctcaagaactggcgcagcaaccagaaaaacagcggtttcacgcccgaagagcgcgag
tggatgacaaagttgttacacaaaactgatcccacgggcggtcttgtggacgtttatcgc
ctgctccagccggacaccacggacgcctgctacacatggtggagcaaccgcggccaggcc
tatgccaacaacgtgggatggcgcctggactaccacctggccaccccggccaccgccgca
ctggctcgcaccgagcacatctacaaggatgtgaagttctcggaccatgcgccggtcacc
atcggctatgacatgaaggtgtga
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