KEGG   Delftia sp. Cs1-4: DelCs14_0454
Entry
DelCs14_0454      CDS       T01497                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
del  Delftia sp. Cs1-4
Pathway
del03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:del00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DelCs14_0454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:del03021]
    DelCs14_0454
   03400 DNA repair and recombination proteins [BR:del03400]
    DelCs14_0454
Enzymes [BR:del01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DelCs14_0454
Transcription machinery [BR:del03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DelCs14_0454
DNA repair and recombination proteins [BR:del03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DelCs14_0454
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C
Other DBs
NCBI-ProteinID: AEF87494
LinkDB
Position
487188..491417
AA seq 1409 aa
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMTEDDYEAKRTEYGDEFEAKM
GAEGIKDLLEGIDIDVETERLRGDLTGSEVKVKKNAKRLKLLEAFKKSGIKPGWMVMEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPYLK
LHQCGLPKLMALELFKPFIFAQLEQRGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYHATRERINGKGEGMIFADIGEVQRALDSDQV
ELAAKISVRLTEWTKNKDSGEFEPSTSLVETTVGRALMSEILPKGLPFSHMNKALKKKEI
SKLINASFRKCGLKATVVFADKLLQNGFRLSTHAGISIAIGDMLVPPQKAEIIGRAEAEV
KEIEQQYVSGLVTAGERYNKVVDIWGKAGDEVSKVMMAQLAKEKVIDRHGNEVEQESFNA
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVNEDDCGTTNGALMRAIVEGGEVIESLRDRVLG
RTTAEDVVHPETLAVLLPAGTLLNEDGIDELELQGVDEIKVRTALNCETRYGLCAKCYGR
DLGRGGQINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGAISFN
STMRYVSNTKGELVVISRSGEIVISDNGRERERHKVPYGAVLTVRPDQQVKAGLILANWD
PLTRPIITEYAGQVRFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPQVKLID
ANNQEVKIPGTDHSVTIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVA
ELFEARTPKDKGTLAEMTGTISFGKETKGKVRMQITDLDGKVWEELVPKEKNILVHEGQV
VNKGESIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRR
VVVENTGDSTYIAGEQVERSEILNTNEALQREGKIPATYSNVLLGITKASLSTDSFISAA
SFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKAKDAMDDAERRAI
ADAEAAELAGVMADDDAGVAAVAGDASAD
NT seq 4230 nt   +upstreamnt  +downstreamnt
atgaaatctctactcgacctgttcaagcaattcacgcctgatgagcatttcgatgccatc
aagatcggtctggcttctcccgagaagatccgctcctggtccttcggcgaggtgaagaag
cccgagaccatcaactaccgcacgttcaagcccgagcgcgatggtctgttctgcgccaag
atctttggccccatcaaggactacgagtgcctgtgcggcaagtacaagcgcctcaagcac
cgcggtgtgatctgcgagaagtgcggcgtcgaagtgacccagaccaaggtgcgccgcgag
cgcatgggccacatcgacctggctgcgccctgcgcccacatctggttcctgaagtcgctg
ccgtcgcgtctgggcctggtgctcgatatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctacgtggtgaccgaccccggcatgactccgctgaagaagttcagcatcatg
accgaggacgattacgaggccaagcgcaccgaatacggtgacgagttcgaagccaagatg
ggcgccgaaggcatcaaggacctgctcgaaggcatcgacatcgatgtcgagaccgagcgt
ctgcgcggcgatctgaccggctccgaagtcaaggtcaagaagaacgccaagcgcctgaag
ctgctggaagcgttcaagaagtccggcatcaagccgggctggatggtcatggaagtgctg
cccgtgctgcccccggacctgcgtccgctggtgccgctggacggcggccgcttcgcgacg
tccgacctgaacgacctgtatcgccgcgtcatcaaccgcaactcgcgtctgcgccgcctg
ctggagctgaaggctccggaaatcatcgcgcgcaacgaaaagcgcatgctgcaggaagcg
gtggactcgctgctggacaacggccgccgtggcaaggccatgacgggcgccaacaagcgt
gccctgaagtcgctggccgacatgatcaagggcaagagcggtcgtttccgccagaacttg
ctgggcaagcgcgtggactattcgggccgttccgtgatcacggtgggtccgtacctcaag
ctgcaccagtgcggtctgcccaagctgatggcgctggaactgttcaagcccttcatcttc
gcgcagctcgagcagcgcggcatcgccaccaccatcaaggcggcgaagaaggaagtcgaa
tccggcacgcccgtggtgtgggacatcctcgaagaggtcatcaaggagcacccggtcatg
ctgaaccgtgctcccacgctgcaccgactgggcatccaggccttcgagcccatcctgatc
gaaggcaaggccatccagctgcacccgctcgtctgcgcggccttcaacgccgacttcgac
ggtgaccagatggctgtccacgttccgctgtcggtggaagcacagatggaagcccgcacg
ctgatgctggcctccaacaacgtgctgttccccgcatcgggcgagccctccatcgttcct
tcgcaggacgtggtgctgggtctgtaccacgcaacgcgcgagcgcatcaacggcaagggc
gaaggcatgatcttcgccgacatcggtgaagtgcagcgcgcgctggactccgaccaggtc
gaactggccgccaagatcagcgtgcgtctgaccgagtggaccaagaacaaggactccggc
gagttcgagccttcgaccagcctggtggaaaccaccgtgggccgcgccctgatgtccgag
atccttcccaagggcctgccgttcagccacatgaacaaggcgctcaagaagaaggaaatc
tccaagctcatcaacgcctcgttccgcaagtgcggtctcaaggccacggtggtgtttgcc
gacaagctgctgcaaaacggcttccgcctgtccacgcacgccggtatctcgatcgccatc
ggcgacatgctggtgccgccgcaaaaggccgagatcatcggccgtgccgaagccgaggtg
aaggagatcgaacagcagtacgtctccggtctcgtgaccgctggcgagcgctacaacaag
gtggtggacatctggggcaaggccggcgacgaagtctccaaggtcatgatggcccagctt
gccaaggaaaaggtcatcgaccgccatggcaacgaagtcgagcaggaatcgttcaacgcc
atttacatgatggccgactccggcgcccgcggctcggccgcacagatccgccagctggcc
ggcatgcgtggcctgatggccaagcctgacggctccatcatcgagacgcccattacggcg
aacttccgtgaaggcctgaacgttctgcagtacttcatctccacccacggcgcccgaaag
ggtctggccgacacggcgttgaagacggccaactccggctacctgacgcgtcgtctggtg
gacgtgacgcaggatctggtggtcaacgaggacgattgcggcacgaccaatggcgcactg
atgcgcgccatcgtcgaaggcggtgaagtgatcgagtcgctgcgcgaccgcgtgctgggc
cgtaccacggccgaggacgtcgtgcatcccgagacgctggccgtcctgctgcccgcaggc
acgctgctcaacgaagacgggatcgatgaactcgagttgcaaggcgtggacgagatcaag
gtccgcaccgcgctgaactgcgaaacccgctacggcctgtgcgccaagtgctacggccgc
gacctgggccgcggcggccagatcaacctcggcgaagccgtgggtgtgatcgccgcccag
tccatcggcgagcccggcacgcagctgaccatgcgtaccttccacatcggtggtgccgct
tcgcgcgctgccatcgcatcgagcgtggaagccaagtccaacggcgccatcagcttcaac
agcacgatgcgttacgtcagcaacaccaagggtgagctggtcgtgatttcgcgttcgggc
gaaatcgtcatcagcgacaacggccgcgagcgtgagcgccacaaggtgccttacggtgcc
gtgctgaccgtcaggcccgaccagcaggtcaaggccggtctgatcctggccaactgggat
ccgctgacccgacccatcattaccgagtacgccggtcaggtgcgcttcgagaatgtggaa
gagggcttgaccgtggccaagcaggtcgacgaagtgaccggcctgtccacgctggtggtg
atcgatcccaagcgccgtggctctgccaaggtcgtgcgtcctcaggtcaagctgatcgat
gccaacaaccaggaagtcaagatccccggcaccgaccactcggtgacgatcggcttccag
gtgggcgctctgatccaggtgcgtgacggccaggacgtgggccccggcgaagtgctggcc
cgtatccctgtcgaaggccagaagacccgcgacattaccggcggtctgccccgcgtggcc
gagctgttcgaagcccgtacgcccaaggacaagggcacgctggccgagatgaccggcacc
atctccttcggcaaggaaaccaagggcaaggtgcgcatgcagatcaccgatctggatggc
aaggtctgggaagagctcgtgcccaaggaaaagaacatcctggtgcacgaaggccaggtg
gtcaacaagggcgagtccatcgtcgacggtcccgccgatccgcaggacatcctgcgcctg
ctgggcatcgaagagctgtcgcgctacatcgttgatgaagtgcaggacgtctaccgtctg
cagggtgtgaagatcaatgacaagcacatcgaggtgatcgttcgccagatgctgcgccgc
gtcgtggtcgagaacaccggcgattcgacctacatcgctggcgagcaggtcgagcgttcg
gaaatcctcaataccaacgaggccctgcagcgcgaaggcaagatccccgccacgtactcc
aacgtgctgctgggtattaccaaggcttcgctgtcgaccgactccttcatctccgccgcg
tcgttccaggaaacgacccgcgtgctcaccgaggctgccatcatgggcaagcgcgacgag
ctgcgtggcctgaaggaaaacgtcatcgtgggtcgcctgatccccgccggtacgggtctg
gcctaccaccaggcacgcaaggccaaggacgccatggacgacgcagagcgccgcgccatc
gccgacgccgaagcggccgaactggccggtgtgatggctgacgacgacgctggcgtggct
gccgtcgccggtgacgcttccgctgactga

DBGET integrated database retrieval system