Delftia sp. Cs1-4: DelCs14_0466
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Entry
DelCs14_0466 CDS
T01497
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
del
Delftia sp. Cs1-4
Pathway
del03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
del00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DelCs14_0466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
del03400
]
DelCs14_0466
Enzymes [BR:
del01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DelCs14_0466
DNA repair and recombination proteins [BR:
del03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DelCs14_0466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
Helicase_RecD
AAA_22
PhoH
UvrD-helicase
SLFN-g3_helicase
AAA_28
TraI_hel_assoc_N
AAA_16
nSTAND3
DEAD
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AEF87506
LinkDB
All DBs
Position
507523..509703
Genome browser
AA seq
726 aa
AA seq
DB search
MSPRPRSRTVDTATLDLFDERPGGEPPGDDSPGGKPPGAVPPDTNELLALLRRWADAGLL
RRLDAALASFVAGQDAQAGPALLVAAALLAQMEGRGHSCLPLAPLAGHPNDVLAWPAEAL
PAQQALWQMLPARLSGWVAALGASPVVRVIGDAGQDGGEDLGQPLVLAGADGPAPLLYLR
RYWDYERAVATHVIQRTAAQAVAGQPLDEALARHWLDRLFPPAAEGGPVDWQKLACALAL
RGRLSVITGGPGTGKTYTAARLLALLFATAPDAGQLRVALAAPTGKAAARLKQSIDGALL
QLQGSMGGEIDLAGLVQRMGAARTLHSMLGARPDTRHWGFHAGRQLDVDVLIVDEASMVH
LEMMAALLEALPAGARLVLLGDKDQLASVEAGAVLGDLCRDAQAGRYLPDTLDYALHVAG
QAVPPQFAAPAGDRPPALAQHTVMLRESRRFGGPIGQLARAVNAGHAAQAQALLDAGTQG
GTHSELWERQGGGVQAVTELAVRGRGGLASYALYAGALQNRPAADGDYEAAHRAWVVDVL
QAFERFRLLCAVREGDWGVSGLNRAVEQALEAQGAIRRSGEWYAGRPVMVTRNDAQLGVF
NGDIGIALPGGSQGGSQGAPQGGPVQPLRVYFLQGDELRSVGVSRLAHVETAFAMTVHKS
QGSEFEHTALVLPSRGGSVLGRELVYTGITRARQAFSLFSEVPGLLASAVGSPTQRASGL
LRWLQD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcgcccccgttcgcggaccgtcgatacggccacgctggacctgttcgacgaa
cggccgggcggcgaaccgccgggcgacgactcgccgggcggcaaaccgccgggcgccgtg
ccgccagacaccaatgaactgctggccctgctgcgccgctgggccgatgccggcctgctg
cggcgcctggatgcggcgctggcttccttcgtcgccgggcaggatgcgcaggccgggccc
gccttgctggtggccgccgcgctgctggcgcagatggaggggcgcggtcacagctgcctg
cccctggcaccgctggccggccaccccaacgacgtgctggcctggcccgccgaggcgctg
cccgcgcagcaggccctgtggcagatgctgcccgcgcgcctgtccggctgggtggcggcg
ctgggtgccagccccgtggtgcgtgtgatcggcgacgcgggccaggatggcggcgaggac
cttggccagcccctggtgctggccggtgccgacggccccgcgcctctgctgtacctgcgc
cgctactgggactacgagcgcgccgtggccacccatgtcatccagcgcacggcggcgcag
gccgtggccggccagccgctggacgaagccctggcccgccactggctggaccgcctgttc
ccccctgcggcggaaggcggccccgtggactggcagaagctggcctgcgcgctggcgctg
cgcggccggctgtcggtgatcacgggcggccccggcaccggcaagacctataccgcggcg
cggctgctggccctgctgtttgccacggcgcccgacgccggccaactgcgcgtggccctg
gccgcgcccacgggcaaggcggctgcgcgcctgaagcaatcgattgacggggccttgctg
caattgcagggcagcatgggcggcgagatcgacctggcgggcctggtgcagcgcatgggc
gcggcgcgcaccctgcactccatgctgggcgcgcggcccgatacgcggcactggggattc
catgcgggccggcagctggacgtggacgtgctcatcgtcgatgaggcctccatggtccac
ctggagatgatggcggcgctgctggaggcactgccggccggcgcccgcctggtgctgctg
ggcgacaaggaccagctggcatcggtggaggcgggcgccgtgctgggcgacctgtgccgc
gatgcccaggccggacgctacctgccggacacgctggactacgcgctgcacgtggccggc
caggcggtgccgccgcagttcgcggcgccggcaggcgaccggcctccggctcttgcgcag
cacaccgtcatgctgcgcgaaagccggcgcttcggtggccccatcggccagttggcgcgc
gccgtgaatgccggccatgccgcgcaggcccaggccctgctcgatgccggcacgcaaggc
ggtacgcactccgaactctgggagcgccagggcggcggcgtgcaggccgtgaccgaactg
gccgtgcgcgggcgtggcggcctggccagctatgcgctgtatgccggggcgctgcaaaac
aggccggctgcggacggcgactacgaggccgcgcaccgggcctgggtggtcgatgtgctg
caggccttcgagcgcttccggctgctgtgcgccgtgcgcgagggggactggggcgtgtcc
ggcctcaaccgggcggtggagcaggccctggaagcgcagggcgcgatccgccgcagcggc
gaatggtatgcgggccggcccgtcatggtcacgcgcaacgatgcgcagctgggcgtgttc
aacggtgacatcggcattgcgctgccgggtgggtcgcagggcgggtcacagggggccccg
cagggtgggcccgtgcagccgctgcgcgtgtacttcctgcagggtgacgagctgcgctcg
gtcggtgtcagccgcctggcccatgtggagaccgccttcgccatgacggtgcacaaaagc
cagggctcggagttcgagcacacggccctggtgctgccctcgcgcggcggcagcgtgctg
gggcgcgagctggtctacaccggcatcacgcgcgcccgccaggccttctcgctgttctcc
gaggtgccgggcctgctggcctcggccgttggcagccccacgcagcgcgccagcgggctg
ctgcgctggctgcaggactga
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