Delftia sp. Cs1-4: DelCs14_0939
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Entry
DelCs14_0939 CDS
T01497
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
del
Delftia sp. Cs1-4
Pathway
del03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
del00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DelCs14_0939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
del03019
]
DelCs14_0939
03110 Chaperones and folding catalysts [BR:
del03110
]
DelCs14_0939
03029 Mitochondrial biogenesis [BR:
del03029
]
DelCs14_0939
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
del04147
]
DelCs14_0939
Enzymes [BR:
del01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DelCs14_0939
Messenger RNA biogenesis [BR:
del03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DelCs14_0939
Chaperones and folding catalysts [BR:
del03110
]
Heat shock proteins
HSP60 / Chaperonin
DelCs14_0939
Mitochondrial biogenesis [BR:
del03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DelCs14_0939
Exosome [BR:
del04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DelCs14_0939
Exosomal proteins of other body fluids (saliva and urine)
DelCs14_0939
Exosomal proteins of breast cancer cells
DelCs14_0939
Exosomal proteins of colorectal cancer cells
DelCs14_0939
Exosomal proteins of bladder cancer cells
DelCs14_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AEF87975
LinkDB
All DBs
Position
complement(1066927..1068570)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQLVKEVASKTNDIAGDGTTTATVLAQAIVREGTKYVAAGLNPMDLKRGI
DKAVAALVEELKKQSKATTTSKEIAQVGSISANSDESVGSIIAEAMDKVGKEGVITVEEG
KSLANELDVVEGMQFDRGYLSPYFINNPEKQVALLDNPFVLLFDKKISNIRDLLPTLEAV
AKAGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLALDKVTLEDLGQAVRIEIGKENTTIIDGAGQAAEIEARVKQIRIQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RAKQAVGDLKTGDAEQDAGIKLIMKAIEAPLREIVANAGGEPSVVVNAVLNGSGNYGFNA
ANDTYGDMLEMGILDPTKVTRTALQNAASVASLLLTTEAMIAESPKAEGGPAMPDMGGMG
GMGGMGM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtagttttcggcggcgaagcacgcgcccgcatggttgaaggcgtg
aacatcctggccaacgcggtcaaggtcaccctgggtcccaagggccgcaacgtggtgctg
gagcgctccttcggcgcccccaccgtgaccaaggacggtgtctcggtcgccaaggaaatc
gaactcaaggacaagctgcagaacatgggcgcccagctcgtgaaggaagtggcctccaag
accaacgacatcgccggtgacggcacgaccaccgccaccgtgctggcacaggccatcgtc
cgcgaaggcaccaagtacgtggccgccggcctgaaccccatggacctcaagcgcggcatc
gacaaggctgtcgccgccctggtggaagagctgaagaagcaatccaaggccaccaccacc
tccaaggaaatcgcccaggtcggctcgatctccgccaactccgacgaatccgtgggcagc
atcattgccgaagccatggacaaggtcggcaaggaaggcgtgatcaccgttgaagaaggc
aagtcgctggccaacgaactcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaacaaccctgaaaagcaggttgccctgctggacaaccccttcgtg
ctgctgttcgacaagaagatcagcaacatccgtgacctgctgcccacgctggaagccgtg
gcaaaggccggccgtcccctgctgatcattgcagaagacgtcgaaggcgaagccctggca
acgctggtggtcaacaccatccgcggcatcctgaaggttgtggctgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggcaaggtc
atcgctgaagaagtgggcctggcgctggacaaggtgaccctggaagacctgggccaggca
gtgcgcatcgaaatcggcaaggaaaacaccaccatcatcgacggtgctggccaagctgct
gaaatcgaagcccgcgtcaagcagatccgcatccagatcgaagaagccaccagcgactac
gaccgcgaaaagctgcaagagcgcgtggccaagctggctggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtcgaaatgaaggaaaagaaggcccgcgttgaagacgccctg
cacgctacccgcgctgctgtggaagaaggcatcgtggccggcggcggcgtggctctgctg
cgtgccaagcaagccgtgggcgacctgaagaccggcgatgccgagcaagacgccggcatc
aagctgatcatgaaggccatcgaagcgcccctgcgcgaaatcgtggccaacgccggtggc
gagccctcggtggtggtcaacgccgtgctgaacggctcgggcaactacggcttcaacgct
gccaacgacacctacggcgacatgctggaaatgggtatcctggacccgaccaaggtgacg
cgtacggccctgcagaacgccgcttccgtggcatcgctgctgctgacgaccgaagccatg
atcgccgagtctcccaaggctgaaggcggccctgccatgcccgacatgggcggcatgggt
ggcatgggcggcatgggcatgtaa
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