Delftia sp. Cs1-4: DelCs14_0951
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Entry
DelCs14_0951 CDS
T01497
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
del
Delftia sp. Cs1-4
Brite
KEGG Orthology (KO) [BR:
del00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
del03000
]
DelCs14_0951
Transcription factors [BR:
del03000
]
Prokaryotic type
Helix-turn-helix
Other families
DelCs14_0951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
GAF
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_28
HTH_30
HTH_7
HTH_17
HTH_29
HTH_23
Mg_chelatase
PAS
UBA_HOIP
PAS_8
UBA
HTH_22
Phage_CP76
HTH_Tnp_ISL3
Xre-like-HTH
AAA_2
PAS_7
DNA_pol3_tau_4
Motif
Other DBs
NCBI-ProteinID:
AEF87987
LinkDB
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Position
1081459..1083426
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AA seq
655 aa
AA seq
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MQSRASLVALRQARHSLMESGLCPSGLVDERLARSWQRCIEQGLRPTGRLGAADNLEQHA
LGVLRSRHHALLAHSRPVMEYLSEQVRGSQSVVVLAGPCGTLVDTCGDPFFLGKAERVAL
ASGASWHEAQRGTNAIGTALAEMDSIEIQGGEHFLERNGFLTCAAAPILSGTGQLLGILD
ISSEHGRGSPHTLGLVGTAARMIENRLMACDGQRHIRLHLHARPEGIGTVAEGIALISAD
GWLVGANRAALALLRLSRAQLGSVSLEQVLDAGLEELLSRQHRQPDAAQPLRRHDGTALF
GQLVPDRRTVRSSVVERVAEQQQQHQQQAPQQPARDALARLDTGDARWRAAADKARRVLG
KPIALLIQGESGVGKEWFARAAHDSGPRRDGPFVAINCAAMPESLIEAELFGYRQGAFTG
GRREGQAGLLRQAHGGTLFLDEIGDMPLSLQTRLLRVLQERQVVPLGGGTPVAVDFALVS
ASNRRLREDADQGRFRADLYYRINGLAVELPPLRERGDFEALAARMLADIEPARPLRMAP
ALLAQLAGHGWPGNLRQCASVLRTACAMLDPHEDCLQWQHLPDDFQAELVQTARSGPRLD
AAPQSLDELSRSAVRQALENCRGNVTQAARMLGISRQTLYRKLAQDRAADGLRLQ
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgagagcctcccttgtggccttgcgccaggcccgtcacagcctgatggagtca
ggcctgtgccccagcggcctggtggacgagcgcctggcgcgctcgtggcagcgctgcatc
gagcagggactgcgtcccaccgggcgcctgggcgccgccgacaacctggagcagcacgcg
ctgggcgtgctgcgcagccgccaccatgcgctgctggcgcattcacggcccgtcatggaa
tacctgtccgagcaggtgcgcggcagccagagcgtggtggtgctggccggcccctgcggc
accctggtggatacctgcggcgaccccttctttctgggcaaggccgagcgcgtggccctg
gccagcggtgcgtcctggcatgaggcgcagcgcggcaccaatgccatcggcacggcactg
gccgagatggactccatcgaaatccagggcggcgagcatttcctggagcgcaacggcttt
ctcacctgcgcggccgcgcccatcctgtcgggcacgggccagctgctgggcatcctggac
atctccagcgaacatggccggggcagcccgcacacgctgggcctggtcggcacggcggcc
cgcatgatcgaaaaccgcctcatggcctgcgacggccagcgccacatccgcctgcacctg
cacgcgcggcccgaaggcattggcacggtggccgaaggcattgcgctgatctccgcggac
ggatggctggtgggcgccaaccgcgccgcgctggccctgctgcgcctgtcgcgggcgcaa
ctgggcagcgtgtcgctggagcaggtgctggacgccgggctggaggagctgctgtcacgc
cagcaccgccagcccgatgcggcccagccgctgcggcgccatgacggcacggcgctgttc
ggccagctggtgccggaccggcgcacggtccggtcctcggtcgtggaacgggttgcagaa
caacagcaacagcaccagcaacaggcgccgcagcagccggcgcgcgatgcgctggcgcgg
ctggacacgggcgatgcgcgctggcgtgcggcggcggacaaggcccggcgcgtgctgggc
aagccgattgcgctgctcatccagggcgagtccggcgtgggcaaggaatggtttgcgcgc
gcggcccacgacagcgggccgcgccgcgacggccccttcgtggccatcaactgcgcggcc
atgcccgagtcgctgatcgaggccgagctgttcggctaccggcagggcgccttcacgggc
gggcggcgcgaagggcaggcgggcctgctgcgccaggcgcacggcggcacgctgttcctg
gacgagatcggcgacatgccgctgtcgctgcagacccggctgctgcgcgtgctgcaggag
cggcaggtggtgccgctgggcggtggcacgcccgttgcggtcgatttcgcgctggtcagc
gcctccaaccgcaggctgcgcgaggatgccgaccaggggcgttttcgtgccgacctgtac
taccgcatcaacggcctggccgtggagctgcctccgctgcgcgagcgcggcgacttcgag
gcgctggccgcgcgcatgctggccgacatcgagcccgcgcgcccgctgcgcatggcgccg
gccctgctggcgcagctggccggccatggctggcccggcaatctgcgccagtgcgccagc
gtgctgagaacggcctgcgccatgctcgacccccatgaggactgcctgcaatggcagcac
ctgcccgacgacttccaggccgagctggtgcagaccgcccgcagcggcccccggctcgac
gctgcgccgcagagcctggatgaactctcgcgctcggccgtgcggcaggcgctggagaac
tgccggggcaatgtcacccaggccgcgcgcatgctgggcatcagccgccagacgctatac
cgcaagctggcccaggaccgtgcggcggacggcttgcggctgcagtga
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