Delftia sp. Cs1-4: DelCs14_1181
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Entry
DelCs14_1181 CDS
T01497
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
del
Delftia sp. Cs1-4
Pathway
del03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
del00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DelCs14_1181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
del03400
]
DelCs14_1181
Enzymes [BR:
del01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DelCs14_1181
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DelCs14_1181
DNA repair and recombination proteins [BR:
del03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DelCs14_1181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AEF88213
LinkDB
All DBs
Position
1336467..1337297
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRAFAAQIAGARIESVALGKPLRWPLGIAPELLAGRDVHGVRRRGKYLLM
ELSEGLLMLHLGMSGSLRFVAPHEAPLGPAGTHDHFDLQTSKGLLRLHDPRRFGAVMYVA
AESDPWARRLLDHLGMEPLDDSFSFETFRAGLKASRTPIKQLLLNGSVVVGVGNIYASEV
LFMARIAPTQPACEVGPRKVRRLFEEIRRVLALAVEQGGTTLRDFSAPDGMAGHFQLQAK
VYGREGLPCTHCGSPVQMLRQGQRSTYFCARCQKAG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaagtagaagtcacgcggcgcgcttttgccgcgcagatcgccgga
gcgcgcattgaatccgtggccttgggcaagcccttgcgctggccgttgggcattgccccc
gagctgctggccgggcgcgatgtgcacggcgtgcgccggcgcggcaagtatctgctgatg
gagctgagcgagggcctgctgatgctgcacctgggcatgtcgggcagcctgcgtttcgtg
gccccccatgaagcaccgctggggccagcaggaacgcatgaccatttcgacctgcagacc
agcaagggcctgctccggctgcacgatccgcggcgctttggtgcggtgatgtatgtggca
gccgagagcgatccctgggcgcgcaggctgctggaccatctggggatggagccgctggat
gacagtttctcgttcgagaccttccgggccggcctgaaggccagccgcacgcccatcaag
caattgctgctgaacggcagcgtggtcgtgggcgtgggcaatatctatgcgtccgaggtg
ctgttcatggcgcgcatcgcgcccacgcagccggcctgcgaggtcgggccgcgcaaggtg
cgccggttgttcgaggagatccgccgcgtgctggccctggcggtggagcagggcggcacg
acgctgcgcgatttctccgcgcccgacggcatggccggccacttccagctgcaggccaag
gtctatggccgcgaaggcctgccctgcacgcattgcggctcgcccgtgcaaatgctgcgc
caggggcagcgcagcacctacttctgcgcgcggtgccagaaggcgggatga
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