Delftia sp. Cs1-4: DelCs14_1275
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Entry
DelCs14_1275 CDS
T01497
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
del
Delftia sp. Cs1-4
Pathway
del03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
del00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DelCs14_1275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
del03019
]
DelCs14_1275
03009 Ribosome biogenesis [BR:
del03009
]
DelCs14_1275
Messenger RNA biogenesis [BR:
del03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DelCs14_1275
Ribosome biogenesis [BR:
del03009
]
Eukaryotic type
Pre-60S particles
RNases
DelCs14_1275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AEF88307
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All DBs
Position
1441645..1442259
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AA seq
204 aa
AA seq
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MSEASEAASACIPVPAEPGTSITLAKSDLNLVWLDCEMTGLQPDTDRIIEIAVVVTSPDL
AIRIEGPVFAIHQADALLDGMDAWNKGTHGRSGLIDRVKASTISEADAEAALIKFLSQYV
PKAKAPLCGNSIGQDRRFMERYMPKLNNFFHYRNVDVSTLKELARRWKPDAYASFKKAQR
HTALADVHESIDELAHYRARLLSV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagcctccgaagccgccagcgcttgcattcccgtccccgccgaacccggcacg
tccatcaccctggccaaatccgatctcaacctcgtctggctcgactgcgagatgaccggg
ctgcagcccgataccgatcgcatcatcgagatcgccgtggtcgtcaccagtccggacctg
gccattcgcatcgaagggccggtatttgccatccatcaggcagatgcgctactcgatggc
atggatgcctggaacaagggcacacatggcaggagcggcctgatcgatcgcgtcaaggca
tcgaccatcagcgaggccgatgcggaggctgcgctgatcaagttcctctcgcagtacgtt
cccaaggccaaggctccgctgtgcggcaacagcatcgggcaggacaggcgcttcatggag
cgctacatgcccaagctcaacaacttcttccactaccgcaatgtcgatgtcagcaccctc
aaggaactggccagacgctggaagcccgacgcctatgcgtccttcaagaaggcccagcgc
cacacggcactggccgatgtgcacgagtccatcgatgagctggcgcactaccgtgcgcgc
ctgctgagcgtctga
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