Delftia sp. Cs1-4: DelCs14_1281
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Entry
DelCs14_1281 CDS
T01497
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
del
Delftia sp. Cs1-4
Pathway
del03420
Nucleotide excision repair
del03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
del00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DelCs14_1281
03430 Mismatch repair
DelCs14_1281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
del03400
]
DelCs14_1281
Enzymes [BR:
del01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DelCs14_1281
DNA repair and recombination proteins [BR:
del03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DelCs14_1281
MMR (mismatch excision repair)
Other MMR factors
DelCs14_1281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
AAA_11
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AEF88313
LinkDB
All DBs
Position
1450639..1453107
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AA seq
822 aa
AA seq
DB search
MFPIDLLDGTSGAAPAPNSPLLTHLNEEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAW
LLQTGQATPGSILAVTFTNKAAKEMLARLSAMLPYNVRGMWIGTFHGLCNRLLRAHHQAA
KLSSTFQILDTQDQLSAVKRLCKQFNVDDERFPPKQLQYFIAGCKEEGMRPGDVVANDPD
TRKKVEIYQLYEEQCQREGVVDFGELMLRSYELLRDDAALRAHYQRRFRHIMVDEFQDTN
KLQYQWLKQLAGDMVDGRLQATGSVIAVGDDDQSIYAFRGARVGNMQDFVREFDVRQQIK
LEQNYRSYSNILDCANALISHNSQRLGKNLRTTQGPGEPVRIYEAPTDMAEAQWMVEEIQ
QLVKKDGWQRQEIAVLYRSNAQSRVIESQLFNAAIPYRVYGGLRFFERAEIKHALAYLRL
LENPHDDTSFLRVVNFPPRGIGARSVETLQDAARSAGCSLHDAVSAVPGAPGTKLAGFVA
KIDVLREQTQGRTLREIIEAIEEESGLLEHYRNEKEGADRIENLQELVNAAESFVTQEGF
GRDAVALPLDEHDGARALTQSPASQGLDPALPLLDTPLTPPAGAVAGMVDADTGETLSPL
AAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGVEEGLFPHENAMMDRGG
LEEERRLAYVAITRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPDEALKWITPKQGGF
GSYAPRPGGGGGGGYGSRDRGGFGNKAEGWRSEVFASPPVPPQKVAPGHGLRVGLNVFHN
KFGEGKVLALEGTGDDARAQVSFGRHGTKWLALSIAKLTVVE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgatcgatctgctcgacggcacctccggtgccgcgcccgcccccaactcccct
ttgctgacccacctcaatgaggagcagctcgctgccgtcacgcttccggccggccacgcg
ctgatcctggccggcgcgggctcgggcaagacgcgggtgctgaccacgcgcatcgcctgg
ctgctgcagacgggccaggccacgccgggctccatcctggccgtgaccttcaccaacaag
gcggcaaaggaaatgctggcccgcctgtcggccatgctgccttacaacgtgcgcggcatg
tggatcggcaccttccacggcctgtgcaaccggctgctgcgcgcccaccaccaggcggca
aagctgtcgtccaccttccagatcctggacacgcaggaccagctgtcggccgtcaagcgc
ctgtgcaagcagttcaacgtggacgacgagcgctttccgcccaagcagctgcagtacttc
attgccggctgcaaggaagagggcatgcgccccggcgacgtggtggccaatgacccggac
acgcgcaagaaggtcgagatctaccagctctacgaggaacagtgccagcgcgaaggcgtg
gtcgatttcggcgagctgatgctgcgctcctacgagctgctgcgcgacgacgccgcgctg
cgcgcccactaccagcggcgctttcgccacatcatggtggacgagttccaggacaccaac
aagctgcagtaccagtggctcaagcagctggcgggcgacatggtggatggccgcctgcag
gccacgggcagcgtgatcgcagtgggcgacgacgaccagagcatctacgcctttcgcggt
gcgcgcgtgggcaacatgcaggacttcgtgcgcgagttcgacgtgcgccagcagatcaag
ctggagcagaactaccgctcctacagcaacatcctggactgtgccaacgcgctcatcagc
cacaacagccagcgcctgggcaagaacctgcgcaccacccaggggccgggcgagcccgtg
cgcatctacgaagcgcccacggacatggccgaggcgcagtggatggtcgaggaaatccag
cagctcgtgaaaaaggacggctggcagcgccaggaaatcgccgtgctctaccgcagcaat
gcgcaaagccgggtgatcgaatcgcagctgttcaatgccgccattccctaccgcgtgtac
ggtggcctgcgctttttcgagcgcgccgaaatcaagcatgcgctggcctacctgcgcctg
ctggagaacccgcacgacgacaccagctttctgcgcgtggtgaacttcccgccgcgcggc
atcggcgcgcgcagcgtggagacgctgcaggacgcggcgcgcagcgcgggctgctcgctg
cacgatgccgtctcggcggtgccgggcgcgccgggcaccaagctcgcaggctttgtcgcc
aagatcgacgtgctgcgcgagcagacccagggccgcacgctgcgcgagatcatcgaggcc
atcgaggaagaaagcggcctgctcgagcactaccgcaacgaaaaggaaggcgccgaccgc
atcgagaacctgcaggaactcgtgaacgcggccgagagctttgtcacccaggaaggcttt
ggccgcgacgccgtggccctgccgctggacgagcacgacggcgccagggcgctgacgcaa
agcccggccagccagggcctggaccctgcgctgccgctgctggacacgccgctcacgccg
ccggccggcgccgtggccggcatggtcgatgccgataccggcgagacactgtcgccgctg
gccgccttcctgacgcacgcggcgctggaggctggcgacaaccaggcccaggccggccag
gacgccgtgcagctgatgaccgtgcatgcctccaaggggctggagttcgacgccgtcttc
atcggcggcgtggaagagggcctgttcccgcatgagaacgccatgatggaccgcggcggc
ctggaggaagaacgccgcctggcctatgtggccatcacccgcgcgcgcaagcgcctgtac
ctgagccattcgcagacgcgcatgctgcacgggcagacgcgctacaacgtcaagagccgc
ttcttcgatgagctgcccgatgaggcgctcaagtggatcacccccaagcagggcggcttt
ggcagctacgcgccccgccccggtggcggcggtggtggcggctatggttcacgcgatcgc
ggcggcttcggcaacaaggccgaaggctggcgcagcgaggtcttcgccagccctcccgtg
ccgccgcagaaggtcgctccgggccacggcctgcgcgtgggcctgaacgtgttccacaac
aagttcggcgaaggcaaggtgctggccctggaaggcacgggcgacgacgcgcgcgcccag
gtcagctttgggcgccacggcacgaagtggctggcgctgtccattgccaagctcacggtc
gtggagtga
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