Delftia sp. Cs1-4: DelCs14_1570
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Entry
DelCs14_1570 CDS
T01497
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
del
Delftia sp. Cs1-4
Pathway
del02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
del00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DelCs14_1570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
del03021
]
DelCs14_1570
Transcription machinery [BR:
del03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DelCs14_1570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AEF88602
LinkDB
All DBs
Position
complement(1775335..1777776)
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AA seq
813 aa
AA seq
DB search
MPVSKSVKSKQAPEAPAKPKTSTTSSAPAKAGAGKAAAGPKSAASAAKAKKDTDVVTKSQ
AELKAMADELLAAATPKRGRKKAAEGDDAPAQTEKKPAAAKKAPAKAAASSTAAAKTPAK
RGRKPKAKEGGDDIDDADLSDIDGDIDGEGEGESEVETEVEVEVETTSAPAEKVKPLRMK
ISKAKERALMKEFGLDETVLTEEEMSTRRQRLKALIKLGKTRGYLTHSEINDHLPDKLVD
AETLEVVISMLNDMGVAVYEQTPDAETLLLNNTGQSATTEEEAEEEAEAALSTVDSEFGR
TTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLMDMMEAISASPATIAEILAMSEEIRE
GKVVISTIVDGFVNANENDDYVAEEDFDEYDEEDDDDGKGGSKALTKKLEELKNEALRRF
DAMRENFDKMHKVYDKDGYGTPVYMKVQKALTEELMTIRFTAKTIEKLCDLVRAQVDDVR
KKERELRKIIVDKCGMPQETFIAQFPPNLLNLQWVVQQVAAGKPWSNVLERNIPPVQELQ
QNLIDLQSRVVVPLDELKRINKRMNDGERASRDAKKEMIEANLRLVISIAKKYTNRGLQF
LDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETIN
KMNRISRQHLQEFGFEPDASILAAKMEIPEDKIRKIMKIAKEPISMETPIGDDDDSHLGD
FIEDTNNTAPVDAAMQAGLRDVVKDILDGLTPREAKVLRMRFGIEMSTDHTLEEVGKQFD
VTRERIRQIEAKALRKLKHPSRSDKLRSFIDSL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtttcaaagtccgtgaagtccaagcaggcccccgaagctccagcgaagcccaag
acttcgacaacctcttcagccccggccaaggccggtgccggcaaagccgctgcaggaccg
aagagcgccgcatctgcggccaaagcaaagaaagataccgacgtggtaaccaagtcccaa
gccgaactcaaagccatggccgacgagctgctcgccgccgcgacccccaagcgcggccgc
aagaaggcagccgaaggcgacgacgcccccgcccagaccgaaaagaagcctgccgccgcc
aagaaggcgccggccaaggcagccgcaagctccaccgccgctgccaagacccccgccaag
cgcggccgcaagcccaaggccaaggaaggcggcgacgacatcgatgatgccgacctgtcc
gacatcgatggcgacatcgacggcgaaggtgaaggcgagtccgaggtcgagaccgaagtg
gaagtcgaggtcgagaccacttcggccccggccgaaaaggtcaagcccctgcgcatgaag
atcagcaaggccaaggaacgcgccttgatgaaggaattcggcctggacgaaaccgtcctg
accgaagaggaaatgtccacccgccgccagcgcctgaaggcgctgatcaagctgggcaag
acgcgcggctacctgacgcacagcgaaatcaacgaccacctgcccgacaagctggtcgat
gccgagacgctggaagtcgtgatctccatgctcaacgacatgggcgtggccgtctacgag
cagactcccgatgcggaaaccctgctgctgaacaacacgggccagtccgccaccaccgaa
gaggaagccgaggaagaggccgaagccgccctgtccacggtggactccgagttcggccgc
accaccgaccccgtgcgcatgtacatgcgcgaaatgggcacggtcgagctgctgacgcgc
gaaggcgaaatcgaaatcgccaagcgcatcgaaggcggcctgatggacatgatggaggcc
atctcggcctcgcctgccaccatcgccgaaatcctggccatgtccgaggaaatccgcgaa
ggcaaggttgtcatctccaccatcgtcgacggcttcgtcaacgccaatgagaacgacgac
tacgtggccgaagaagacttcgacgaatacgacgaagaggatgacgacgacggcaagggc
ggctccaaggcgctgaccaagaagctcgaagaactcaagaacgaggcgctgcgccgcttc
gacgccatgcgcgagaacttcgacaagatgcacaaggtgtacgacaaggacggctacggc
acgcccgtgtacatgaaggtgcagaaggccctgaccgaagagctgatgaccatccgcttc
acggccaagaccatcgagaagctgtgcgaccttgtgcgcgcccaggtggatgacgtgcgc
aagaaggaacgcgagctgcgcaagatcatcgtggacaagtgcggcatgccgcaggagacc
ttcatcgcccagttcccgcccaacctgctgaacctgcagtgggtggtgcagcaggtcgcg
gccggcaagccctggagcaatgtgctggagcgcaacatcccgcccgtgcaggagctgcag
cagaacctgatcgacctgcaatcgcgcgtggtcgtgccgctggacgagctcaagcgcatc
aacaagcgcatgaacgatggcgagcgcgccagccgtgacgccaagaaggagatgatcgag
gccaacctgcgcctggtgatctccatcgccaagaagtacacgaaccgcggcctgcagttc
ctggatctgatccaggaaggcaacatcggcctgatgaaggcggtggacaagttcgaatac
cgtcgcggctacaagttctcgacctatgccacgtggtggatccgccaggccatcacgcgc
tcgatcgccgaccaggcgcgcaccatccgcatcccggtgcacatgatcgagaccatcaac
aagatgaaccgcatctcgcgccagcatctgcaggagttcggcttcgagcccgatgcgtcc
atcctggcggccaagatggagatccccgaggacaagatccgcaagatcatgaagatcgcc
aaggagccgatctccatggaaacgccgatcggcgacgacgacgattcgcacctgggcgac
ttcatcgaggacaccaacaacaccgctcccgtggacgccgccatgcaggccggcctgcgc
gacgtggtcaaggacatcctcgacggcctcaccccgcgcgaagccaaggtgctgcgcatg
cgcttcggcatcgaaatgtccaccgaccacacgctggaagaagtgggcaagcagttcgac
gtcacgcgcgaacgcatccgccagatcgaggccaaggccctgcgcaagctcaagcacccg
agccgctcggacaagctgcgcagcttcatcgactcgctgtaa
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