Delftia sp. Cs1-4: DelCs14_1953
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Entry
DelCs14_1953 CDS
T01497
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
del
Delftia sp. Cs1-4
Brite
KEGG Orthology (KO) [BR:
del00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
del01011
]
DelCs14_1953
Enzymes [BR:
del01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DelCs14_1953
Peptidoglycan biosynthesis and degradation proteins [BR:
del01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DelCs14_1953
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AEF88973
LinkDB
All DBs
Position
complement(2204910..2206445)
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AA seq
511 aa
AA seq
DB search
MKLLHTLLLGSLLALAGCATTSSPDLASTAPAPSTAPHSPMYPNGPLSPLGTGSAGNGGV
ASLETTGDLWVRIRQGFAMPDLDQDLVKDREQWYASRPDYIQRMTERSSKYLFHIVEELE
RRNMPTELALLPYIESAFNPQAVSTAKAAGMWQFMPATGTYFDLKQNAFRDDRRDVLAST
RAALDYLQKLYDMFGDWHLALAAYNWGEGSVGRAIKRNEKLGLPTGYTDLQMPAETRMYV
PKLQAVKNIVANPDAFNTELPLIENHPYFQTVTITRDIDVELVAKLADVSTDDFKALNPS
FRKPVIFAAGTPEILLPWDNAKVFRRNMQAFDEGQYASWTVWTVPSTISVAEAAQRVGLG
ESDLRALNNIPPRMLIKAGSALMVPRGANVRADVAGHVADNGQISFAPEIVTRRTTIKAR
KRDTLISVANRYGVSASNLADWNDLKSSATLHAGQSLVAYLPVRASSGGNARAAKSTGTA
RKVAVQPQNRNAKVSVTTAPRGGKPSKVKKR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctacacaccctgctgctgggcagcctgctggctcttgcgggctgcgccacc
accagcagcccggacctggccagcacggcccccgcccccagcaccgcaccgcactccccg
atgtaccccaacggaccgctgagcccgctgggcacaggcagcgccggcaacggcggcgtg
gcctcgctggagaccacgggcgatctgtgggtacgcattcgccagggcttcgccatgccc
gacctggaccaggatctggtcaaggaccgcgagcagtggtatgccagccggcccgactac
atacagcgcatgaccgagcgctccagcaagtacctgttccacatcgtcgaggaactggag
cggcgcaacatgcccaccgagctggcactgctgccctacatcgagagcgccttcaacccg
caggccgtctccaccgccaaggcggccggcatgtggcagttcatgccggccaccggcacc
tatttcgacctcaagcaaaacgccttccgcgacgaccgccgcgacgtgctggcctccacg
cgcgccgcgctggactacctgcaaaagctctacgacatgttcggcgactggcacctggcc
ctggctgcctacaactggggcgaaggcagcgtgggccgcgccatcaagcgcaacgagaag
ctgggcctgcccacgggctacaccgacctgcagatgccggccgagacccgcatgtacgtg
cccaagctgcaggccgtcaagaacatcgtggccaaccccgatgcgttcaacaccgagctg
ccgctgatcgagaaccacccctacttccagaccgtcaccatcacccgtgacatcgacgtg
gaactggtggccaagctggccgacgtgtcgaccgatgacttcaaggcgctgaatcctagc
ttccgcaagccggtgatctttgcggccggcacgccggagatcctgctgccctgggacaac
gccaaggtgttccgccgcaacatgcaggccttcgacgaaggccagtacgcgagctggacc
gtgtggaccgtgccttccaccatcagcgtggccgaggcggcccagcgcgtgggcctgggc
gagtccgacctgcgcgccctcaacaacatcccgccccgcatgctgatcaaggccggctcc
gcgctcatggtgccgcgcggcgccaacgtgcgtgccgacgtggccggccacgtggccgac
aacggccagatcagctttgcccccgagatcgtcacgcgccgcaccaccatcaaggcccgc
aagcgcgacacgctgatcagcgtggccaaccgctacggcgtcagcgcatccaatctggcg
gactggaatgacctgaagtcctccgccaccctgcatgccggccaatcgctggtggcctac
ctgccggtgcgcgccagcagcggcggcaatgcccgggcggccaagtccaccggaaccgca
cgcaaggtggccgtgcagccgcaaaaccgcaacgccaaggtgtcggtcaccacggcgccg
cgtggcggcaagccatccaaggtgaaaaagcgctga
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