Delftia sp. Cs1-4: DelCs14_3132
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Entry
DelCs14_3132 CDS
T01497
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
del
Delftia sp. Cs1-4
Pathway
del02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
del00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DelCs14_3132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
del03021
]
DelCs14_3132
Transcription machinery [BR:
del03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DelCs14_3132
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_20
HTH_11
HTH_IclR
HTH_24
DUF6362
HTH_29
HTH_28
DUF8658
HTH_Tnp_4
HTH_40
HAC6_helical
Motif
Other DBs
NCBI-ProteinID:
AEF90134
LinkDB
All DBs
Position
3542100..3542630
Genome browser
AA seq
176 aa
AA seq
DB search
MDAQISQSAKATTSVESLYHSHQNWLQGWLRRRLDDSFDAADMAQDVFMRLLTRQPGPDA
TGLRQPRAYLSTIAHGLLVDHWRRRELERAWLETLALMPEAQAPSPESRLIFLETLVAID
RMLDALKPRVRSAFLWAQLEGLTCPQIAERLGVSLATAERYIATALRHCYALRFGA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcagatttcccagtccgccaaggcgacaaccagcgtggaaagcctgtaccac
agccaccagaactggctgcagggctggttgcggcgccggttggacgactccttcgacgcg
gccgacatggcgcaggacgtgttcatgcgcctgctcacccgccaacccggccctgacgca
accggcctgcgccagccccgcgcctacctgagcaccattgcccatggcctgctggtggac
cactggcgccgccgcgagctggaacgtgcctggctcgagaccctggccctcatgcccgag
gcgcaggccccctcgccggaaagccggctgatcttcctggaaaccctggtcgccatagac
cgcatgctggatgccttgaagccccgcgtgcgcagcgcttttctgtgggcgcagctggaa
ggactcacctgcccgcagatcgccgaacgactgggcgtgtccctggccacggccgagcgc
tacatcgccacggccctgcgccactgctacgcactgcgcttcggggcatga
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