Delftia sp. Cs1-4: DelCs14_3623
Help
Entry
DelCs14_3623 CDS
T01497
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
del
Delftia sp. Cs1-4
Pathway
del02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
del00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DelCs14_3623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
del03021
]
DelCs14_3623
Transcription machinery [BR:
del03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DelCs14_3623
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_11
HTH_23
DUF6221
Motif
Other DBs
NCBI-ProteinID:
AEF90615
LinkDB
All DBs
Position
complement(4098341..4098964)
Genome browser
AA seq
207 aa
AA seq
DB search
MRPVSIECVSFSIPPLRLPPCPGRSAEETVSSTESALQQRMAALYADHHGWLRGWLRRRV
GNAFDAADVAHDTFVRILASRDVLLGMAEPRAYLTTTARRLLVDRARRQAMAQAYLDELA
LVAQSLPGYPAPEEILMAVQALEQIGAALEGLAERPREAFLRHYLDEQPQAEIAQGLGVS
TRMVQKYLVQALLHCRAHCPAVAEHVR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctgtctcgatagaatgcgtttcattctcaattccgccgctgcggctgccgcct
tgccccgggcgcagcgcagaagaaaccgtgtcttccaccgaatccgcgctgcagcaacgc
atggctgccctttatgccgaccaccatggctggttgcgcggctggctgcggcgcagggtg
ggcaatgcgtttgatgcggccgatgtggcgcatgacacgtttgtgcgcatcctggcgtcg
cgcgatgtgctgctgggcatggcggagccacgcgcctacctgacgaccacggccaggcgg
ctgctggtggaccgggcgcggcgccaggccatggcgcaggcctatctggatgagctggcg
ctggtggcgcaaagcctgcccggctatccggcgcccgaagaaatcctgatggcggtgcag
gcgctggagcagattggcgctgcgctggaggggctggccgagcgcccgcgcgaggcgttt
ctgcgccactacctggacgagcagccgcaggccgagattgcacagggcctgggtgtttcc
acgcgcatggtgcagaagtacctggtgcaggcgctgctgcactgccgcgcccattgccct
gccgtggccgagcatgtccggtag
DBGET
integrated database retrieval system
