Delftia sp. Cs1-4: DelCs14_4822
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Entry
DelCs14_4822 CDS
T01497
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
del
Delftia sp. Cs1-4
Pathway
del00300
Lysine biosynthesis
del00470
D-Amino acid metabolism
del01100
Metabolic pathways
del01110
Biosynthesis of secondary metabolites
del01120
Microbial metabolism in diverse environments
del01230
Biosynthesis of amino acids
Module
del_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
del_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
del00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DelCs14_4822
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DelCs14_4822
Enzymes [BR:
del01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DelCs14_4822
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
AEF91794
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Position
5430917..5432170
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AA seq
417 aa
AA seq
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MSNPFSPAQLWALADQHGTPLWVYDAATIRARIAQLKAFDTIRFAQKACSNIHILRLMRE
QGVKVDAVSRGEILRALAAGYAAGHGDDLHSDIVFTADVMDEATLACVAEHKVPVNAGSI
DMLHQLAHASPGHPVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSDLLAALQAIRDGGLK
LAGLHMHIGSGVDYGHLQQVCGAMVELVRATRQAGHDLQAISAGGGLSIPYRDGDATIDT
AHYHGLWDAARKDAEAIVGHALGLEIEPGRFLVAESGVLLGQVRATKNAGSNHFVLVDTG
FNELMRPSMYGSWHGMEVLRRDGQAMPLRDAVVAGPLCESGDVFTQGDGGVVLPRALAGA
SVGDLLVIHDTGAYGSSMSSNYNTRPLAAEVLVDGDSARLIRRRQTVEELLGLELGL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcccttctcgcccgcccagctctgggccctggccgaccagcacggcacgccg
ctgtgggtctatgacgccgccaccatccgcgcacgcatcgcccagctcaaggccttcgac
accatccgctttgcacagaaggcctgctccaacatccacatcctgcggctgatgcgcgag
cagggcgtgaaggtggacgccgtctcgcgcggcgaaatcctgcgcgcgctggccgccggc
tacgcggccggccatggcgacgacctgcacagcgacatcgtgttcaccgccgacgtgatg
gacgaggccacgcttgcctgcgtggccgagcacaaggtgcccgtgaacgccggctccatc
gacatgctgcaccagctggcccatgcctcgcccggccatcccgtgtggctgcgcatcaac
cccggcttcggccacggccacagcaacaagaccaacacgggtggcgagcacagcaagcac
ggcatctggcacagcgacctgctggcggcgctgcaggccatccgcgacggcggcctgaag
ctggccggcctgcacatgcacatcggctcgggcgtggactacggccacctgcagcaggtc
tgcggcgccatggtcgagctggtgcgcgccacccgccaggcaggccatgacctgcaggcc
atctcggccggcggcggcctgtccatcccctaccgcgatggcgacgccaccatcgacacc
gcccactaccacggcctgtgggatgcggcacgcaaggacgccgaggccatcgtgggccat
gcgctgggcctggagatcgagccgggccgcttcctggtggccgagtcgggcgtgctgctg
ggccaggtgcgcgccaccaagaacgcgggcagcaaccatttcgtgctggtcgacacgggc
ttcaacgagctgatgcgcccttccatgtacggcagctggcacggcatggaagtgctgcgc
cgcgacggccaggccatgcccctgcgcgatgccgtggtcgccggccctctgtgcgaatcg
ggcgacgtgttcacccagggcgacggcggcgtggtgctgccgcgcgcgctggcaggcgcc
tcggtgggcgacctgctggtcatccatgacacgggggcctatggcagctccatgtccagc
aactacaacacgcgcccgctggccgccgaggtgctggtcgatggcgacagcgcgcgcctg
atccgccgccgccagacggtggaagaactgctgggtctggagctgggcctgtaa
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