Delftia sp. Cs1-4: DelCs14_5016
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Entry
DelCs14_5016 CDS
T01497
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
del
Delftia sp. Cs1-4
Brite
KEGG Orthology (KO) [BR:
del00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
del03016
]
DelCs14_5016
Enzymes [BR:
del01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DelCs14_5016
Transfer RNA biogenesis [BR:
del03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DelCs14_5016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AEF91987
LinkDB
All DBs
Position
5641525..5642853
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AA seq
442 aa
AA seq
DB search
MSKKVFIKTFGCQMNEYDSDKMADVLGAAQGYESTDDPEQADLILFNTCSVREKAQEKVF
SDLGRYKHLKERGVLIGVGGCVASQEGEEIIKRAPYVDVVFGPQTLHRLPELLNARAAKH
KPQVDISFPEIEKFDHLPPARVEGSSAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFEDVL
IEVAGLADQGVKEVTLLGQNVNAYLGKMGDTAEIADFALLLEYVSEIPGIERIRYTTSHP
NEFTPRLIEAYARLPKLVSHLHLPVQHGSDKILMAMKRGYTAMEYKSTIRKLRAIRPEMA
MSSDFIVGFPGETEEDFQKMMKLIHDVRFDNSFSFIFSPRPGTPAANLHDDTPHEVKLRR
LQELQAVINNNIKDISDERVGTVQRLLVEGLSKRDGSELMGRTECNRVVNFPGNERLIGQ
MIDVKITEARTFTLRGEVVVRH
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaagtctttatcaaaaccttcggctgccagatgaacgagtacgactcggac
aagatggccgatgtgctgggcgcagcccagggctacgagtccaccgacgatcccgagcag
gccgacctgatcctgttcaacacctgctcggtgcgcgagaaggcgcaggagaaggtgttc
agcgacctgggccgctacaagcacctgaaggaacgcggcgtgctcatcggcgtgggcggc
tgcgtggccagccaggagggcgaggaaatcatcaagcgcgcgccctatgtggacgtggtc
ttcggcccgcagaccctgcaccgcctgcccgagctgctcaatgcacgcgccgccaagcac
aagccccaggtcgatatcagctttcccgagatcgagaaattcgaccaccttccgcccgca
cgcgtggaaggctcctcggccttcgtctccatcatggaaggctgctccaagtactgcagc
tactgcgtcgtgccctatacgcgcggcgaggaagtcagccgcccgttcgaggacgtgctc
atcgaggtcgccggcctggccgaccagggcgtgaaggaagtcacgctgctgggccagaac
gtcaacgcctacctgggcaagatgggtgacacggccgagatcgccgactttgccctgctg
ctggagtacgtatccgagatccccggcatcgagcgcatccgctacaccaccagccacccc
aacgagttcacgccgcgcctgatcgaggcctacgctcggctgcccaagctggtcagccac
ctgcacctgcccgtgcagcacggcagcgacaagatcctcatggccatgaagcgcggctac
acggccatggaatacaagagcaccatccgcaagctgcgcgccatccggcccgaaatggcc
atgagcagcgacttcatcgtgggcttccccggcgagaccgaggaagacttccagaagatg
atgaagctcatccacgacgtgcgcttcgacaacagcttcagcttcatcttcagcccccgc
cccggcacgccggccgccaacctgcacgacgacacgccgcacgaggtcaagctgcgccgc
ctgcaggagctgcaggccgtgatcaacaacaacatcaaggacatcagcgacgagcgcgtg
ggcacggtacagcgcctgctggtggaaggcctgtccaagcgcgatggcagcgaactcatg
ggccgcaccgagtgcaaccgcgtggtcaacttcccgggcaacgaacgcctgatcggccag
atgatcgatgtgaagatcaccgaggcccgcaccttcacgctgcgcggtgaagtcgtggtg
cgccactga
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