Delftia sp. Cs1-4: DelCs14_5348
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Entry
DelCs14_5348 CDS
T01497
Name
(GenBank) pseudouridine synthase Rsu
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
del
Delftia sp. Cs1-4
Brite
KEGG Orthology (KO) [BR:
del00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
del03009
]
DelCs14_5348
Enzymes [BR:
del01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
DelCs14_5348
Ribosome biogenesis [BR:
del03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DelCs14_5348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AEF92318
LinkDB
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Position
complement(6022478..6024280)
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AA seq
600 aa
AA seq
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MCGAEHGEPAGSQGRVAGLARGPGGLPAGRPIAERNARIGRRAQPLRALPRDNGGLMSSP
TSSKPSRPGADEAAAPSARPVLRRPEKPQAEPAGDARRPSGGAGKSAGARGGPRSDRNDR
NERGGDRGGRNDRYERSDRRDAPPRGDARGGAPRGDARGAAPRDDARDQRPRSSGFGRAE
DLDRSQPRGDWREQGGGENRAPREQRDMRDARDTRDARPPRPPRPDDRRDRPYGQRDERP
RDGQRDGQRDGPRDGPREGGFRDRPRDDARGPRRDDARGPRRDDARGPRRDDARGPRRDD
ARGPRRDEAPQAEPAYRPLSGIRTYRPADGGASREIPVKRAPEPLQEQVPGGVRINKRLA
DMGLCSRREADEWVDKGWVRVNGELAVMGQNVVAADRITVEREARERQDQQVTILIHKPM
GYVSGQAEDGHEPAVVLVTPQNHWNQDTSRTRFNFAQLKGLAPCGRLDIDSVGLLVMTQD
GRVARQIIGEDSEMDKEYLVRVTYGDRDIDVQSVFPAEQLARLCHGLSLDGEALKPAKVD
WQNPEQLRFVLTEGKKRQIRRMCELVGLRVVGLKRIRIGRVTLGNLPVGQWRYLGAHENF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggtgcggaacatggcgagcccgccgggtcgcagggccgggtggcggggctggca
aggggccctggcggcctgcccgcaggccgcccgatagccgagcgcaatgcccgtattggc
cgcagggcgcagccgctgcgggccttgccgcgcgacaatggcggtctaatgtcatcccct
acttcttccaaaccgtcccggcccggcgccgacgaggcggcagcgccctccgcgcgccct
gtgctgcgccgccccgaaaagccacaggccgagccggctggcgatgcccgccgcccttcg
ggtggcgcgggcaaatctgcgggcgcacgcggcggcccgcgcagtgaccgcaacgaccgc
aatgaacgtggcggcgaccgtggcggccgcaatgatcgctacgagcgctccgaccgccgt
gatgccccccctcgcggcgatgcccgcggtggggcaccccgaggcgatgcccgcggtgca
gcaccccgcgacgacgcccgtgaccagcgcccgcgcagcagcggtttcggccgtgccgag
gacctggaccgttcccagccgcgtggcgactggcgcgaacagggcggcggcgaaaaccgt
gccccgcgcgagcagcgcgacatgcgcgatgcccgtgatacgcgcgatgcccgccccccg
cgcccgccccgcccggacgatcgccgcgaccggccctatggccagcgcgatgagcgtccg
cgtgatggtcaacgcgatggccagcgcgacggtccccgtgacggcccgcgtgaaggtggt
ttccgcgaccgtccccgtgacgatgcccgcggcccccgccgtgacgatgcgcgcggaccg
cgccgcgacgacgcccgtggtccccgccgtgatgacgcccgtggcccgcgccgtgatgac
gcccgtggcccgcgccgcgacgaggcgccccaggccgagcccgcctaccgtccgctcagc
ggcatccgcacctaccgtcccgccgacggtggcgccagccgcgaaatccccgtcaagcgt
gctcccgagccgctgcaggagcaggttcccggtggcgtgcgcatcaacaagcgcctggcc
gacatgggcctgtgctcgcgccgcgaagccgacgagtgggtggacaagggctgggtccgc
gtcaacggcgaactcgccgtgatgggccagaacgtggtggcggccgaccgcatcaccgtc
gagcgcgaagcgcgcgagcgccaggaccagcaggtcaccatcctgatccacaagcccatg
ggctatgtcagcggccaggccgaggacggccacgagcccgccgtggtcctggttacgccc
cagaaccactggaaccaggacaccagccgcacgcgcttcaacttcgcgcagctcaagggc
ctggctccctgcggccggctggacatcgactccgtgggcctgctggtcatgacccaggac
ggccgtgtggcgcgccagatcattggcgaagactcggagatggacaaggagtacctggtg
cgcgtgacctacggcgaccgcgacatcgacgtgcaatccgtgttcccggccgagcagctg
gcacgcctgtgccatggcctgtcgctcgatggcgaggcactcaagcccgccaaggtggac
tggcagaaccccgagcagctgcgctttgtgctgaccgaaggcaagaagcgccagatccgc
cgcatgtgcgaactggtgggcctgcgcgtggtgggcctcaagcgcatccgcatcggccgc
gtgacgctgggcaacctgcctgtgggccagtggcgctacctgggtgcacacgagaatttt
tag
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