Delftia sp. Cs1-4: DelCs14_5632
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Entry
DelCs14_5632 CDS
T01497
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
del
Delftia sp. Cs1-4
Brite
KEGG Orthology (KO) [BR:
del00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
del03400
]
DelCs14_5632
DNA repair and recombination proteins [BR:
del03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DelCs14_5632
Archaeal homologous recombinant proteins
DelCs14_5632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_15
nSTAND3
RsgA_GTPase
AAA_21
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEF92602
LinkDB
All DBs
Position
6329980..6333465
Genome browser
AA seq
1161 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWRIDFTQAPFAGNGLFAITGATGAGKSTLLDAICLALYHQTPR
LNNISASANDLMTRHTADCLAEVEFEVKGQVYRAFWSQRRARDRLDGALQAPKVELARGD
GSILSSQTRDKLEQTAAITGLDFERFTKSMLLAQGGFAAFLEANANVRAGLLEELTGTEI
YGLISQKVFERARDARQRLDQLKAQADGVELLTPEARDALQAQADSLVTEQATLQADYLR
TQAQHQWQQQLAQATQTLQAARTGCADAAQALEQAAPELERLAHDEPAQALQPLHQAWQR
STAACDDSRQQLQQLREHEQQTQARLLLQHRHAQALSARLAQAAQDTLARQQAEHQTLEQ
FCTQHAAHALLGERLGSWRQQFKLRASQQQQAANQQQALRKLDAEQARMAQSAEAGAAQV
QAATDAQACASAALQHAQDEQAQRLQGSGGMAELRAREQAEQDRLHLWRQAETQAAQRRE
LARQQQTLARELREGTALAQQQTDTWQALRTRYIDVREQVRDKQKLLAQEQRIQSLSEHR
HALQPGQPCPLCGAQEHPAVAAYEALDASATEAALRRKQDELDALQTQGETARATLAATT
AAQAARQRQADELEQDIARWHGTWNDTWQGLTQPLQLAPGSWQQADTLAASAQACARQLD
TLKRAVQAAEQGEQAVQQAKDAAQHSRQSLQTAQGQLALQQQALADHSARREELQQSIAG
LLAEAQALNTQLQASLGEASHTVPDEAQPWLEAREAEWQHWQQARHDLQQLAQSMALQRK
ECEAAEADAQRWNKQWETQWEGQGTAQPHPADTAVAKPPSLPLPPVEQLPQALAGCASDI
AALTRQQDALQGQQQQAQATLARQREEAAQAESAWQAALSTSPFADEPAYLQALLPAPER
QRLAALRQQLQAAQQRAATLLEAAQREHADLQAQALTDLAPEAIQALLQTLQERHTALSE
QLGGARAQLADDQRRRQGQQALFEHISAQASDSDLWQHLDGLIGSAKGDKYRRFAQGLTL
DHLLHLANLHLARLHGRYLLRRKPEGELELDIVDSWQGDTPRDTRTLSGGEAFLVSLALA
LALSDLVSHKTSIDSLFLDEGFGTLDADTLEIALDALDRLNDSGKMIGIISHVEALKERI
AVQVRVEKGGGVGHSRLVVSS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccttacgctgcggctcaagaacctcaactcgctcaagggcgaatggcgcatc
gacttcacgcaggcaccgttcgcgggcaacggcctgttcgccatcaccggggccacgggc
gcgggcaagtccaccctgctcgatgccatctgcctggcgctgtaccaccagacacccagg
ctgaacaacatctcggcatcagccaacgacctcatgacgcgccacacggcagactgcctg
gccgaggtcgaattcgaggtcaaggggcaggtctaccgcgccttctggagccagcgccgc
gcacgcgacaggctcgatggcgcgctgcaggcgcccaaggtggaactggcccgtggcgac
ggcagcatcctcagcagccagacgcgcgacaagctggagcagaccgctgccatcacgggg
ctggacttcgagcgcttcaccaagtccatgctgctggcccagggcggctttgcggcgttc
cttgaagccaatgccaacgtccgcgccggcctgctggaagagctgacaggcaccgagatc
tacggcctcatctcgcaaaaagtcttcgaacgcgcccgcgatgcgcgccagcgcctggac
cagctcaaggcccaggccgatggcgtggagttgctgacgcccgaggcgcgcgatgccctg
caggcccaggccgacagcctggtgacggagcaggccacgctgcaggccgactacctgcgc
acccaggcccagcaccaatggcagcagcaactggcccaggccacccagacactgcaggcc
gcccgcaccggctgcgcagacgccgcccaggcactggagcaggccgcgcccgaactggaa
agactggcccatgacgagcccgcgcaggcgctgcaaccgctgcaccaggcctggcagcgc
agcaccgccgcctgcgatgacagccgccagcaactgcagcaactgcgcgagcacgaacag
cagacccaggcccggctgctgctgcagcaccgccatgcccaggccctgtccgcccgcctg
gcccaggccgcgcaagacaccctggcccgccagcaggccgagcaccaaacgctggaacag
ttctgcacccaacatgccgcacatgccctgctgggcgagcgcctgggcagctggcgccag
cagttcaagctgcgcgccagccagcaacagcaagcggccaaccagcagcaggccctgcgc
aagctggatgccgaacaggcccgcatggcgcaaagcgccgaagccggcgcggcccaggtc
caggccgccaccgacgcccaggcctgcgccagcgccgcactccagcacgcgcaggacgaa
caggcgcagcgccttcaaggcagcggcggcatggccgagctgcgcgcgcgcgagcaggca
gagcaggaccgcctgcacctgtggcgccaggcagaaacccaggccgcgcagcgccgcgaa
cttgcgcgccagcaacagacactggcccgggaattgcgcgaaggcacagcactggcgcag
cagcagacggacacctggcaagccctgcgcacgcgctacatagacgtgcgagaacaggtc
cgcgacaagcaaaagctgctggcccaggagcagcgcattcaaagcctgtccgagcaccgc
cacgccctgcagcccggccagccctgcccgctgtgcggcgcgcaagagcacccggccgtg
gccgcctacgaagcgctggacgcctcggccacagaagccgcgctgcgccgcaagcaggat
gaactcgacgccctgcaaacccagggcgaaaccgcccgcgccacgctggccgccaccacg
gccgcacaggctgcgcgccagcgccaggccgacgaactggaacaggacatcgcacgctgg
cacggcacatggaacgacacatggcagggcctcacgcaacccctgcaactcgcgccaggc
agttggcaacaggccgacaccctcgccgcatcggcccaggcctgcgcccgccagctggac
acgctcaagcgcgccgtgcaggccgccgagcaaggcgagcaggccgtgcaacaggccaag
gacgccgcccagcacagccgccagtcactgcagaccgcgcaaggccagcttgcgctgcag
cagcaggccctggccgaccacagcgcacgccgcgaagaactgcagcaatccatcgccggc
ctgctggccgaagcccaggcgctgaacacgcagttgcaggcttcactcggcgaggccagc
cacacggtgcccgatgaggcccagccctggcttgaagcgcgcgaagccgaatggcagcac
tggcaacaggcccggcacgacctgcagcaactggcccaatccatggccttgcagcgcaag
gaatgcgaggcggccgaggccgatgcgcagcgctggaacaaacagtgggaaacacagtgg
gaggggcagggaacggcgcagccccatcccgccgatacggctgtggcaaagccgccttcc
ctgcccttgccgcccgtggaacagctgccgcaggccctggccggatgcgccagcgacatc
gccgctctcacgcgccagcaggatgccctgcaaggccagcagcaacaggcccaggccacg
ctggcccgccagcgcgaggaagcggcacaggccgaatccgcatggcaggccgccctgagc
accagcccctttgctgacgagcccgcctacctgcaggccctgctgcccgcacccgaacgc
cagcgcctggccgcgctgcgccagcaactgcaggcggcacaacagcgcgcggccaccctg
ctggaagccgcgcaacgcgagcacgcggatctgcaggcccaggccctgaccgacctggca
cccgaagccatccaggcgctgctgcaaacactgcaggagcgccatacggcactcagcgaa
caactgggcggcgcccgcgcccagctggccgatgaccagcgccgccgccagggccagcag
gccctgttcgagcacatctccgcccaggccagcgacagcgacctgtggcagcacctggat
ggcctcatcggctcggccaagggcgacaaataccggcgcttcgcccagggcctcaccctg
gaccacctgctgcacctggccaacctccacctggcacgcctgcacggccgctacctgctg
cgccgcaagcccgaaggcgagctggaactggacatcgtcgacagctggcagggcgacacc
ccgcgcgacacgcgcacgctatcggggggcgaagccttcctcgtcagcctggccctggca
ctggccctgtccgacctggtcagccacaagacctccatcgactccctgttcctcgacgaa
ggcttcggcacgctcgatgccgacacgctggagatcgcgctcgacgcactcgaccggctc
aacgacagcggcaagatgatcggcatcatcagccacgtggaggcgctcaaggagcgcatc
gccgtgcaggtgcgggtggagaaaggcggtggcgtggggcattcgaggctggtggtttct
tcgtga
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