KEGG   Desulfovibrio sp. 86: DESU86_0549
Entry
DESU86_0549       CDS       T11413                                 
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
delf  Desulfovibrio sp. 86
Pathway
delf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:delf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DESU86_0549 (exoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:delf03400]
    DESU86_0549 (exoA)
Enzymes [BR:delf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     DESU86_0549 (exoA)
DNA repair and recombination proteins [BR:delf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     DESU86_0549 (exoA)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: VZH32665
LinkDB
Position
DESU86:complement(563954..564760)
AA seq 268 aa
MQFKLVSWNVNGLRAVSAKAEWDWFTQTDADVVALQETKAHPEQLDETVREPAGWESRWA
SSSVKKGYSGVAVYSRRPFLSCSAELPQPEYQGEGRLLHLEYPAFHFFNGYFPNGGAEEL
DENGKPTGAFKRVSYKMGYFEAFLAYAEECRKTKPIVVCGDFNIAHRPIDLARPRQNEKN
TGFLPEERAFMDRFLAMGYVDTFRHVHGDAPDNYSWWSYKSRAREKNVGWRIDYFFVSQE
LAPAIRDAWIEQDVYGSDHCPVGLSLEV
NT seq 807 nt   +upstreamnt  +downstreamnt
atgcagttcaaacttgtatcctggaacgtcaacggcctgcgtgcggtatccgccaaggct
gaatgggactggttcacgcagaccgatgcggatgtggtggccctgcaagaaaccaaggcc
caccccgaacaactggacgagaccgtgcgcgagcctgcgggctgggaatcccgctgggcg
tccagcagtgtaaaaaagggctattccggcgtggccgtatacagccgcagaccttttttg
tcgtgcagcgcggaactgccgcagcccgaatatcagggtgaggggcgtctgctgcatctg
gaatacccggcatttcatttttttaacggttatttccccaacggcggcgctgaagagctg
gacgaaaacggcaaacccacaggcgcattcaagcgggtgtcctacaaaatgggctatttc
gaggcgtttctggcctatgccgaagaatgccgtaaaacaaaacccattgtggtctgcggc
gatttcaacatcgcgcaccggcccattgatctggcccgccccaggcagaatgaaaaaaat
acgggctttctgcccgaagaacgggcctttatggatcgttttcttgccatgggctatgtg
gacacgttccgtcatgtgcacggcgacgcgcccgacaactattcttggtggtcgtacaag
agccgagcgcgcgaaaagaacgtgggctggcgcattgactactttttcgtgtcgcaggag
cttgcgcccgccatccgcgacgcctggatcgagcaggacgtgtacggctcggaccattgc
cctgtgggcctgagccttgaggtgtag

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