Desulfovibrio sp. 86: DESU86_1637
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Entry
DESU86_1637 CDS
T11413
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
delf Desulfovibrio sp. 86
Pathway
delf03030
DNA replication
delf03430
Mismatch repair
delf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
delf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DESU86_1637
03430 Mismatch repair
DESU86_1637
03440 Homologous recombination
DESU86_1637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
delf03032
]
DESU86_1637
03400 DNA repair and recombination proteins [BR:
delf03400
]
DESU86_1637
Enzymes [BR:
delf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DESU86_1637
DNA replication proteins [BR:
delf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DESU86_1637
DNA repair and recombination proteins [BR:
delf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DESU86_1637
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
VZH33753
LinkDB
All DBs
Position
DESU86:complement(1648122..1649276)
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AA seq
384 aa
AA seq
DB search
MKLTVNKEQIIEGLLKAVAIIPAKAGAQYLRSIWLKADNGGLSVMSTDANIEFTGCYQAE
VAEPGLIGVQGRAFVDLVRQLPSGVLHLSLDEASGNLLIEQGRRSYKLPVSGAEWFQNFS
TFPEENTVTWSGDFLQDVLDKVTFCISEDDAMDAIACLCMKPKGNGRIDVCGLNGHQFAL
VSFTHDELAERLPEEGILIQKKYLQDIKKWLGVDEIELNITEKRLYLRSLGKAETLSLPR
AAHQYPDYNIFMSKLASGDMHPMTLERKEAMEALGRILIFNTESDRCTYMDLSASEALLS
AQGQDVGSANESLEVAYGGDIKRIAFPTRSLMDVLGHFVSAKIDMMLTGAEGPCGVRGAD
DPDYTVIIMPMKVSETTYYSEEDV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaactgtgaataaagaacagatcatcgaaggtctgctgaaggccgttgccatt
attcccgccaaggcaggggcgcagtatctgcgctccatctggctcaaggcggataacggc
gggctttcggtcatgtccacggacgccaacatcgagttcacgggctgctatcaggcagaa
gtggcggagcccggcctcataggggtgcagggcagagcctttgtggatctggtgcgtcag
ctgccttcgggcgtgctgcatctttcccttgacgaggcgtcgggcaatctgctcattgaa
cagggccgccgctcttataaactgccggtaagcggcgctgaatggtttcagaatttttcc
acctttcctgaagaaaacaccgtgacctggtcaggagactttcttcaggacgtgctggac
aaggtgacgttctgcatcagcgaggacgacgccatggacgccatagcctgcctgtgcatg
aagcccaagggcaacgggcgcatcgacgtgtgcggtcttaacggccaccagttcgccctt
gtatcctttacccatgacgagcttgccgagcggctgcccgaagagggcatactcatccag
aagaaataccttcaggatatcaagaaatggcttggcgttgacgaaattgaactgaacatc
accgaaaaacgcctgtacctgcgcagccttggcaaggccgagaccctgagcctgccgcgc
gcggcgcaccagtatcccgactacaacatcttcatgagcaagctggccagcggcgacatg
catcccatgacccttgaacgcaaggaagccatggaagctctgggccgcatacttatcttc
aataccgagagcgaccgctgcacctatatggacctttccgccagcgaagccctgctttcc
gctcaggggcaggacgtgggctcggccaatgaaagccttgaagttgcctatggcggcgat
atcaagcgtatagcctttcccacgcgcagccttatggatgtgctcggacactttgtttcc
gccaagatagacatgatgctcaccggggctgaaggcccctgcggcgtgcgtggcgctgac
gaccccgattacacggtcatcatcatgcccatgaaggtttctgaaacgacctactatagc
gaggaagacgtttaa
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