Desulfovibrio sp. 86: DESU86_1721
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Entry
DESU86_1721 CDS
T11413
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
delf Desulfovibrio sp. 86
Pathway
delf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
delf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DESU86_1721 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
delf01007
]
DESU86_1721 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
delf03016
]
DESU86_1721 (serS)
Enzymes [BR:
delf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DESU86_1721 (serS)
Amino acid related enzymes [BR:
delf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DESU86_1721 (serS)
Transfer RNA biogenesis [BR:
delf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DESU86_1721 (serS)
Prokaryotic type
DESU86_1721 (serS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF5594
ERM_helical
PMD1-like
Phage_scaffold
Consortin_C
Motif
Other DBs
NCBI-ProteinID:
VZH33837
LinkDB
All DBs
Position
DESU86:complement(1744149..1745480)
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AA seq
443 aa
AA seq
DB search
MSQFYRVSGAIQRNFSGAVMIDLKLVQRQPEVLAKALADRHSDLSVDAFLELDGKRRTLL
TEIEGLKSKRNEASGQVAALKRSGQDATELLAELSTLSDRIKNLEGETVQAKADVESWLM
RVPNIPDCSVPLGANENENVEVSRWGSPRQFDFEVREHGDIGVALGGLDFERAARLTGSR
FVVSLGWGARLERALAAFFLDRHTIHGDYTEVSPPYMVNRATMTGTAQLPKFEEDLFKLQ
DWDYFLIPTAEVPLTNLHAGEVLDEADLPRAYCAATPCFRSEAGSAGKDTRGIIRMHQFT
KVEMVRFAHPEDSFNQLELMRGHACALLELLELPYRVITLCTGDMGFSSAKTYDVEVWMP
AQKTYREISSCSNCTDFQARRADIRFKPKGGKATFVHTLNGSGLPTGRTTAAILENCQQK
DGSVVLPKALVPYMNGLEVIEPR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattttaccgcgtatccggcgcgatacagcgcaatttttcaggagcggtcatg
atcgatctcaaactggtgcagaggcagcccgaagtattggccaaggctctggccgaccgt
cattcggatctcagtgtggacgcgtttcttgagctggacggcaaacgccgcaccctgctc
actgaaatcgaagggctcaagagcaaacgcaatgaggcttccggacaggtggcggccctc
aagcgctctgggcaggatgccacggaactgcttgccgagctctccaccctgtctgaccgc
atcaagaatcttgaaggcgaaacagtgcaggccaaggccgatgtggaaagctggctcatg
cgcgtgcccaacattcctgactgctccgtgcccctgggcgccaacgagaatgaaaatgtc
gaggtaagccgctggggcagcccgcgtcagttcgactttgaggtgcgcgagcacggcgac
atcggcgttgccctcggcggtctggactttgagcgcgccgcgcgcctgacaggcagccgc
tttgtggtgtccctgggttggggagcccgccttgagcgcgctctggccgccttttttctc
gacaggcacaccatccacggcgactataccgaggtgagcccgccctatatggtcaaccgc
gccaccatgacgggcacggcccagttgcccaagttcgaggaagacctgttcaagctgcag
gactgggactattttctcattcccacagccgaagtgccgctgaccaacctgcacgccggc
gaagtgctggacgaggccgacctgccccgcgcctactgcgcggccaccccctgcttccgc
tccgaagcgggcagcgctggcaaggacacgcgcggcatcatacgcatgcaccagttcacc
aaggtggagatggtgcgctttgcccatcccgaagacagcttcaaccagcttgaactcatg
cgcggccacgcctgcgccctgctggaactgctggaactgccctaccgcgtcatcaccctg
tgcaccggcgacatgggcttttcctccgccaagacctatgatgtggaagtgtggatgccc
gcgcagaaaacctacagggaaatatcgtcctgctccaactgcaccgattttcaggcgcgc
cgggcagacatccgcttcaagcccaagggcggcaaggccacctttgtccataccctcaac
ggctccggcctgcccacaggccgcaccaccgccgccattctggaaaactgccagcaaaaa
gacggcagcgtcgttttgcccaaggcgctggttccctacatgaacggccttgaggttatc
gaaccgcgctag
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