Desulfovibrio sp. 86: DESU86_1742
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Entry
DESU86_1742 CDS
T11413
Symbol
recD
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
delf Desulfovibrio sp. 86
Pathway
delf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
delf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DESU86_1742 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
delf03400
]
DESU86_1742 (recD)
Enzymes [BR:
delf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DESU86_1742 (recD)
DNA repair and recombination proteins [BR:
delf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DESU86_1742 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
PIF1
UvrD-helicase
AAA_22
NAT10_TcmA_helicase
AAA_29
nSTAND3
AAA_28
MeaB
AAA
ABC_tran
PhoH
RsgA_GTPase
NTPase_1
SLFN-g3_helicase
AAA_16
NPHP3_N
T2SSE
DEAD
NB-ARC
AAA_7
Mg_chelatase
GntR
HHH_2
TrwB_AAD_bind
cobW
TsaE
AAA_23
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
VZH33858
LinkDB
All DBs
Position
DESU86:complement(1763302..1765569)
Genome browser
AA seq
755 aa
AA seq
DB search
MKEMSLLQDPDAVELTGTIERVVFHNEENGYTVLRLMPGSVNSSGGDGGLTRPRDSVSCV
GHMVNPQAGVQMKLSGRWVNNTRFGRQVEFSNVEEMMPATSEGIRLYLASGLIKGVGDEM
ATRIVKAFGTDTIRVLDEEPERLLKVRGVGQKSLERIRTSWAEHRGIRDLLLFLQPHGIT
PAYAVRIYRAYGGDALNIVRENPYRLAMDIHGIGFVTADAAARKLGFEHDHPLRIQAGTL
YVLQKATDDGNVYLPESALMEAVCAQLGVDEGLVSEALSSLEEDERIVREDMDMPGPGPD
SDAHVCLPETGVYLRRYFHCESKTAFYLQRLLNSPKSIRFENADATVDKVVAQLDIALAP
EQLEAVRMAARSKVMVLTGGPGTGKTTIINAIINLFAEVRARILLAAPTGRAAKRMAETS
GREARTIHRLLEYSPKEDGFARNEDSPLACGLLVVDEASMMDTLLFYHLLKAVPLGATLV
LVGDVHQLPSVGPGNVLADVINSGVVPVVELTEIFRQSAESEIICNAHLINKGEVPSLES
SKDRLSDFYFIHQNDPEKAAELIVDLVRNHIPRRFGFDSVDDIQVLTPMHKGAVGAGQMN
ARLQEALNPNGLEVRRGERAFRLHDKVMQIRNNYDKDVFNGDMGRISFMDLADRTLSVTF
DDRVVPYEFDELDELAPAYAISIHKSQGSEYPAVVIPIMMQHYMLLQRNLVYTGATRGKK
LVILVGESRALHMAVKNNKTRKRYTRLAERLRPPC
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaatgtccctgctgcaagacccggatgccgttgaacttaccggcaccatcgag
cgcgtcgtctttcacaacgaagagaacggctataccgttctgcgtctcatgcccggcagc
gtcaacagctcgggcggcgacggcggcctcacccgcccgcgagactcggtgagctgcgtg
ggccatatggtcaatccgcaggcaggggtgcagatgaaactcagcgggcgctgggtcaac
aacacccgttttggccgtcaggtggagttcagcaacgtcgaggagatgatgcccgccacc
agcgagggcatccgcctgtatctggcgtccggcctcatcaagggggtcggtgatgaaatg
gccacccgcatcgtcaaggcctttggcactgacaccatccgcgtgctggacgaagagccg
gaacgcctgctcaaggtgcgcggcgtggggcaaaagagccttgagcgcatccgcacgtcc
tgggccgagcaccggggcatacgcgacctgctgctctttttgcagccccacggcatcacc
ccggcctatgccgtgcgcatttaccgcgcctatggcggtgacgcgctgaacattgtgcgc
gagaacccgtaccgtctggccatggacattcacggcatcggctttgtcacggccgatgcg
gcggcgcgcaagctcggttttgagcatgatcaccccctgcggattcaggcgggcacgctg
tatgtgctgcaaaaagccacggacgacggcaacgtatatttgccggaatccgccctgatg
gaagccgtgtgcgcccagttgggcgttgacgagggcctggtgagcgaagccctgtcttcc
cttgaggaggacgagcgcattgtgcgcgaagatatggatatgcccggccccgggccggat
tccgacgcgcacgtctgcctgccggaaaccggcgtttatctgcgccgctatttccactgc
gaatccaagacggccttttatctgcaaaggctgctcaattctcccaagtccatccgcttt
gaaaatgccgacgccaccgtggacaaggtggtggcgcaactggacatagcgcttgcgccc
gaacaacttgaagccgtgcgcatggcggcgcgcagcaaggttatggtgctcacgggcggc
cccggcacgggcaagacaaccatcatcaacgccatcataaatctttttgccgaggtgcgc
gcccgcatattgctggcggcccccacaggccgcgccgccaagcgcatggccgaaacctcc
gggcgcgaggcccgcaccatccaccgccttctggaatacagccccaaggaggacggcttc
gcccgtaatgaggacagccccctcgcctgcggcctgctcgtcgtggacgaagcgtccatg
atggacaccctgcttttttaccacttgctcaaggccgtgccgctgggcgctacccttgtg
ctggtgggcgacgtgcatcagctgccctcggtggggccgggcaacgtgctggccgacgtg
atcaactccggcgtcgtgcccgtagtggaactgacggaaatcttccgccagtcggcggag
agcgaaatcatctgcaacgcccacctcatcaacaagggcgaggtgccttcgctggaatcc
agcaaggacaggctttcggatttttattttatccaccagaacgatcccgaaaaggccgcc
gagcttatcgttgaccttgtgcgcaaccatataccgcgtcgtttcggttttgattccgtg
gacgatattcaggtgctgacccccatgcacaagggggccgtgggcgcgggacagatgaac
gcccgcctgcaggaggccctgaaccccaacggacttgaagttcggcgcggcgaacgggcc
ttccgcctgcacgacaaggtcatgcagatacgcaacaactatgacaaggacgtttttaac
ggggacatgggccgcatcagctttatggatctcgctgaccgcaccctcagcgtcaccttt
gacgaccgcgtcgtgccgtacgagtttgatgaactggacgaactggccccggcctacgcc
atatccatccacaaatcccaggggtcggagtatcccgccgtggtcattcccatcatgatg
cagcactatatgctgttgcagcgcaatctggtctacaccggggccacgcgcggcaaaaaa
ctggtcattcttgtgggtgagtcgcgcgcgctgcatatggccgtcaaaaacaacaagacg
cgcaagaggtacaccaggttggcggagaggttgcggcccccttgctag
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