Desulfovibrio sp. 86: DESU86_3129
Help
Entry
DESU86_3129 CDS
T11413
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
delf Desulfovibrio sp. 86
Brite
KEGG Orthology (KO) [BR:
delf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
delf03032
]
DESU86_3129 (hup)
03036 Chromosome and associated proteins [BR:
delf03036
]
DESU86_3129 (hup)
03400 DNA repair and recombination proteins [BR:
delf03400
]
DESU86_3129 (hup)
DNA replication proteins [BR:
delf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DESU86_3129 (hup)
Chromosome and associated proteins [BR:
delf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DESU86_3129 (hup)
DNA repair and recombination proteins [BR:
delf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DESU86_3129 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_1
Urease_beta
Motif
Other DBs
NCBI-ProteinID:
VZH35242
LinkDB
All DBs
Position
DESU86:complement(3229049..3229321)
Genome browser
AA seq
90 aa
AA seq
DB search
MSKSDLIKKLKEEAGLATLAQAEAAYEKLFASIAETLKSGNAVTIPGFGSFKTTKRAARK
GRNPRTGAEIQIPASTVVKFTPGKALKESL
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcagacctgatcaaaaaactgaaagaagaagccgggcttgccacactggcc
caagccgaagcagcgtatgaaaagttatttgccagcattgccgagacattgaagagtggc
aatgccgttaccattccgggctttggcagcttcaaaaccacaaagcgcgctgcccgcaaa
ggccgcaaccctcggacaggcgctgaaattcaaatccctgcgtcaacggtggtgaagttc
acccccggcaaggcactgaaggaaagtctgtag
DBGET
integrated database retrieval system