Desulfitobacterium elongatum: DESULF6_33340
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Entry
DESULF6_33340 CDS
T11905
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
delo Desulfitobacterium elongatum
Pathway
delo03420
Nucleotide excision repair
delo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
delo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DESULF6_33340 (pcrA)
03430 Mismatch repair
DESULF6_33340 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
delo03400
]
DESULF6_33340 (pcrA)
Enzymes [BR:
delo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DESULF6_33340 (pcrA)
DNA repair and recombination proteins [BR:
delo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DESULF6_33340 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DESULF6_33340 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
BFU39995
LinkDB
All DBs
Position
complement(3576469..3578739)
Genome browser
AA seq
756 aa
AA seq
DB search
MYRLEDLNPVQRQAVEHRDGPLLILAGAGSGKTRVLTYRIAHLVAQGIEPWNILAITFTN
KAAQEMRERVAALVGSEGRGLWVATFHSACVRILRSEIEHLPGYNRSFVIYDSGDQQAVI
KSCMKELDLDDKKFPPRAIGGAISDAKNKLLSPEEFSQRATDYFEKKVEKVYTLYQKKLK
ANNALDFDDIIMLTVRLFRENPEVLAHYQEKFRYILVDEYQDTNHAQYALVNLLAKRYRN
LCVVGDDDQSIYMFRGADVQNILDFERDYPEAVVLKLEQNYRSTQRILEAANSVVQNNTE
RKEKSLWTENQEGNPLIYYVADNEHDEARYVAERIQRLRSVEGRRFNDFAILYRTNAQSR
VIEERFMKEGIPYRVFSGLKFYERMEIKDIIAYLRVLHNPSDQVSFSRILNVPKRGLGDS
TLEKILDYADEQGMPVLDAIMEADYIPDLTTRAKKPLFAFAQLMQELKGLAHEESSVTKL
VEEILKKTGYWDILIAEKTPEAEARAENVREFLSVTAEYDAKAEDQANAPEEGPEGEETV
VPGLAGFLEQVSLVAQIDSLDQGEEAAVMMTIHSAKGLEFPVVFLGGMEEGIFPSSRSMI
DPTLLAEERRLCYVAITRAREKLYLTYAGQRMLYGRTQYNRPSEFFEEIPQHLLQDRDPI
DPPPSRQKSRPQSGSGEVRVSGGRSTWGTWDSKNVGNPLKESTGTEYHVGEKVEHAKFGK
GLIVSVKGEGNQAEISVVFEGQIKKLIAEYAKLTKI
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgattagaggatctaaacccggtccagcgtcaggctgtagagcaccgggacggc
ccgttattgattttagcgggtgctggttcagggaaaacacgggtattaacttatagaatt
gcccatttagtcgctcaaggaattgagccttggaatatcctagcgattacctttactaat
aaagccgctcaggaaatgcgggagcgggttgcggctttggtcggaagtgaaggtagggga
ctttgggtcgctacgtttcactcggcctgtgtccggattttaaggagtgaaatcgagcat
ctaccggggtataaccggagtttcgtcatatatgatagcggggatcaacaagccgtcatc
aaatcgtgtatgaaagaattggatctcgatgataagaaatttcctccgagagcgattggt
ggggcgattagtgatgcgaaaaataagcttctaagcccagaggaattctcacaacgagcc
acggattactttgagaaaaaggtagagaaggtgtacacactttaccagaaaaagctcaaa
gccaacaacgccttggattttgatgatatcatcatgcttacggttcggctcttccgggag
aacccagaggttctggctcattaccaagaaaagtttcgctacatcctcgtggatgagtat
caagatacaaaccatgcacagtatgctttagttaatctcttagcgaagagatatcggaat
ctctgtgtcgtaggagacgatgaccagtcgatttatatgtttcggggagcagacgttcaa
aacatcctggattttgaacgagattatcctgaagctgtggtcttgaagcttgagcagaat
taccgctcaactcagcgcattctggaggcggctaattccgtcgtccagaataatacagaa
cgaaaagagaaatctctctggacagagaaccaggaagggaatccactcatttactatgtt
gcggacaatgagcatgatgaggcacgctatgtcgccgaacgaattcaaaggctccgtagt
gtggaaggacgccgctttaatgacttcgcgattctctatcgaacgaatgcccagtctcgg
gtgattgaagaacggtttatgaaggaaggaattccctaccgtgtgttctccgggcttaag
ttctatgagcgaatggaaatcaaggacattatcgcctatctgcgcgttcttcataaccct
tcagaccaggtgagtttctcccgaatccttaatgtcccgaaaaggggcctaggagacagt
acactggaaaagatccttgattatgcggatgaacaaggaatgcctgttcttgatgccatt
atggaagcagactatatacccgacttaaccactcgggcgaagaaacccttatttgctttt
gcccaacttatgcaagagcttaagggattagcccatgaagagagctccgtgaccaagctc
gttgaagagattcttaagaaaactggatactgggatatccttatcgcggagaaaactcca
gaggcagaggcacgggcagaaaacgttcgcgagttcctctctgtcacggctgagtatgat
gccaaagcagaagaccaagccaatgctccggaggaaggacccgagggggaggaaactgtc
gttcctggccttgcaggtttcctcgagcaggtctccttggtggcgcagattgactccttg
gatcaaggagaagaggctgctgtcatgatgacgattcatagtgctaaggggcttgaattc
cctgtcgtcttcctcggagggatggaagaagggatttttccaagtagccgttcgatgatt
gatcctaccctcctcgcagaagagcgtcgtctttgttatgtcgcaattactcgtgcacgg
gaaaagctgtatttgacctatgcgggtcaacgtatgctctatggaaggacacaatataac
cgcccttcagagttttttgaagaaattccccagcatttgcttcaggatcgtgatccaatc
gatccaccgccaagtcggcaaaaatcacgcccccagtcgggaagcggggaagttagggtt
tctggaggacgctcaacctggggtacctgggactcaaaaaatgtaggtaatcccctgaag
gaatctacagggactgagtatcatgtcggggaaaaggtagagcatgccaagttcggcaaa
ggactgattgtttctgtcaaaggagaaggaaatcaggctgagatttctgtggtctttgaa
ggacagataaaaaagctcattgcggaatatgctaaactcacaaaaatctaa
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integrated database retrieval system
