Delftia sp. UGAL515B_04: OK021_05315
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Entry
OK021_05315 CDS
T11538
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
delu Delftia sp. UGAL515B_04
Pathway
delu03030
DNA replication
delu03430
Mismatch repair
delu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
delu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OK021_05315 (holA)
03430 Mismatch repair
OK021_05315 (holA)
03440 Homologous recombination
OK021_05315 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
delu03032
]
OK021_05315 (holA)
03400 DNA repair and recombination proteins [BR:
delu03400
]
OK021_05315 (holA)
Enzymes [BR:
delu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OK021_05315 (holA)
DNA replication proteins [BR:
delu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OK021_05315 (holA)
DNA repair and recombination proteins [BR:
delu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OK021_05315 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WON90065
LinkDB
All DBs
Position
complement(1152274..1153326)
Genome browser
AA seq
350 aa
AA seq
DB search
MQLALNQLGGHLAKGLRSLYVLHGDEPLQQQEAADAIRAAARAAGYTERSSYTVAGAHFD
WSAVLAAGGSLSLFADRQIIEIRIPSGKPGKDGGAALQQIAEAARGNDSTLTLVMLPRLD
KATRTGAWFSALEAQGMTLQIDPIERGQLPAWIAQRLAAQGQRVAPGEEGQRTLQFFADR
VEGNLLAAHQEIQKLALLHPAGELSQAQVEQAVLNVARYDVFKLSEAVLSGQLARVSRML
DGLQAEGTAEVLVHWTLAEDIRSICRVKDAMAAGQPLPMALRAQRVWGVKERLFERLLPR
ITDAQAARLLQSAHAVDGIVKGLAFEGWPRDGWQALRRLAMDLAQAGAKG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgccctgaaccagctcggcggccatctggccaagggattgcgctcgctctac
gtgctgcacggcgacgagccgctgcagcagcaggaggctgccgacgccatccgtgccgcc
gcgcgcgccgcgggctacaccgagcgcagcagctacaccgtggccggcgcccatttcgac
tggagtgccgtgctggcggccggtggttcgctgtcgctgtttgccgatcggcagatcatc
gagatccgcattccctcgggcaagcccggcaaggacggcggcgccgcgctgcagcagatc
gccgaggcggcgcgcggcaatgacagcacgctcaccctggtcatgctgccgcgcctggac
aaggccaccaggaccggcgcctggttcagcgcgctggaagcccagggcatgacgctgcag
attgatcccatagagcgcggccagctgccggcctggattgcccagcgcctggcagcccag
ggccagcgcgtggcacccggcgaggaaggccagcgcacactgcagttctttgccgaccgc
gtcgagggcaacctgctggccgcacaccaggagatccagaaactggccctgctgcacccc
gccggcgagctgagccaggcgcaggtggagcaggcagtgctcaatgtggcgcgctacgac
gtgttcaagctgtccgaggccgtgctgtccggccagttggcgcgcgtttcgcgcatgctc
gacggcctgcaggccgagggcacggccgaggtgctggtgcactggaccctggccgaggac
atccgctccatctgccgcgtcaaggacgccatggccgcaggtcagcccctgcccatggcc
ctgcgcgcccagcgcgtctggggcgtcaaggagcgtttgttcgagcgcctgctgccgcgc
atcaccgacgcccaggccgcgcgcctgctgcaatcggcccacgcggtggacggcatcgtc
aagggcctggccttcgagggctggccccgcgacggctggcaggccctgcgccgcctggcc
atggacctggcccaggccggcgccaagggctga
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