Delftia sp. UGAL515B_04: OK021_07640
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Entry
OK021_07640 CDS
T11538
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
delu Delftia sp. UGAL515B_04
Pathway
delu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
delu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OK021_07640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
delu03400
]
OK021_07640
Enzymes [BR:
delu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
OK021_07640
DNA repair and recombination proteins [BR:
delu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
OK021_07640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5648
Motif
Other DBs
NCBI-ProteinID:
WON90509
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All DBs
Position
complement(1655951..1656754)
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AA seq
267 aa
AA seq
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MFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFHY
AEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPARKLSIISAYFPSGSSG
ELRQTAKFRFLAEMHEHLMRMKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFTPEERE
WMTKLLHKTDPTGGLVDVYRLLQPDTTDTCYTWWSNRGQAYANNVGWRLDYHLATPAIAA
LARTEHIYKDVKFSDHAPVTIGYDMKV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattgaccagcctcaacctcaacggcatccgctcggcctcgaccaagggcgtc
gaagcctggatcgaggccactgcgccggattgtatttgcgtgcaggaaatcaaggcccag
gccgccgacatgaccggacgcttcgagctgctggccggcctgcgcggccacttccactac
gccgagaaaaagggctactcgggcgtgggcgtctacagccgccacgagcccagcgatgtc
gtggtcggcttcggctcgcacgagttcgacgccgagggccgctatgtggaggcgcgcttc
gacacgcccgcgcgcaagctgtccatcatcagcgcctactttcccagcggcagctccggc
gaactgcgccagacggccaagttccgcttcctggccgaaatgcacgagcacctgatgcgc
atgaagggcgagcgcgagttcatcctgtgcggcgacatcaatatcgcccaccagcagatc
gacctcaagaactggcgcagcaaccagaaaaacagcggtttcacgcccgaagagcgcgag
tggatgacaaagttgttacacaaaactgatcccacgggcggtcttgtggacgtttatcgc
ctgctccagcccgacaccacggacacctgctacacatggtggagcaaccgaggccaggcc
tatgccaacaacgtgggatggcgcctggactaccacctggccaccccggccatcgccgca
ctggcacgcaccgagcacatctacaaggatgtgaagttctcggaccatgcgccggtgacc
atcggctatgacatgaaggtgtga
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