Delftia sp. UGAL515B_04: OK021_10885
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Entry
OK021_10885 CDS
T11538
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
delu Delftia sp. UGAL515B_04
Pathway
delu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
delu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OK021_10885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
delu03021
]
OK021_10885
Transcription machinery [BR:
delu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OK021_10885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
HTH_24
Sigma70_r4
PhyR_sigma-like
HTH_28
HTH_29
MarR_2
HTH_5
HTH_IclR
HTH_11
HTH_36
HTH_AsnC-type
HTH_40
GerE
HTH_10
MarR
Motif
Other DBs
NCBI-ProteinID:
WON91120
LinkDB
All DBs
Position
2373293..2373814
Genome browser
AA seq
173 aa
AA seq
DB search
MPAADRALVPDVATLYSDHHGWLLGWLRKRLGNAFDAADLTQDTYVRLLGRSGAEIQAIR
EPRALLMTIAQGLAANLYRKRCVEQAYLDALALMPEAVAPSPEHRAIVLQTLVEVDRLLA
LLPLPVRQAFLLSQIDGVRQADIAAELGLSVPTVRRHIARAVVQVCFLDDDGA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccgaccgcgcccttgttcccgatgtcgccactctctactccgaccaccac
ggctggctgctgggctggctgcgcaagcgcctgggcaatgcctttgatgcggccgatctg
acccaggacacctatgtgcgcctgctgggccgtagcggcgccgagatccaggccattcgc
gaaccgcgtgccctgctgatgaccattgcccagggtctggccgccaacctctaccgcaag
cgctgcgtggagcaggcctatctggacgccctggccctcatgcccgaggccgtggccccg
tcccccgagcaccgcgccatcgtgctgcagaccctggtcgaggtggaccgcctgctggcc
ctgctcccactgcccgtgcgccaggcctttttgctgtcgcagatcgacggcgtgaggcag
gccgacatcgcggctgaactgggcctttccgtgcccaccgtgcgccgccatatcgcgcgg
gccgtggtgcaagtctgctttctggacgacgacggcgcatga
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