Delftia sp. UGAL515B_04: OK021_15080
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Entry
OK021_15080 CDS
T11538
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
delu Delftia sp. UGAL515B_04
Pathway
delu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
delu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OK021_15080 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
delu03021
]
OK021_15080 (rho)
03019 Messenger RNA biogenesis [BR:
delu03019
]
OK021_15080 (rho)
Transcription machinery [BR:
delu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OK021_15080 (rho)
Messenger RNA biogenesis [BR:
delu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OK021_15080 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA
S1CSD-TOTE-2
Spore_III_AA
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
WON91914
LinkDB
All DBs
Position
complement(3299517..3300779)
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AA seq
420 aa
AA seq
DB search
MHLNELKALHVSEVLKQAEALEIENVGRMRKQELMFAIIKKRAKAGEQVFADGVLEILPD
GFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRTPKDGERYFALTKLDSVN
GGSPEQNKHKVLFENLTPLFPTQQLRLEREIKGEENITGRIIDIIAPIGRGQRALIVAPP
KSGKTMMMQSIAHAITANHPDVHLMVLLVDERPEEVTEMQRSVKGEIIASTFDEPATRHV
HVAEMVIERAKRLVELKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDSNALQRPKRF
FGAARNVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELALNRRLYEKRVFPAIEL
NKSGTRREELLLAPEILQKTRILRQFMYNMDEIEAMELMIKNMRATKTNVDFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttaatgaactcaaggcactgcacgtgtctgaagtcctgaagcaggccgaagcg
cttgagatcgaaaacgtcggtcgcatgcgcaagcaagagttgatgttcgccatcatcaaa
aagcgcgccaaggccggggaacaagtgttcgccgacggcgtgctggaaatcctgccggat
ggtttcggcttcctgcgcagccccgacaccagctacacggccagcaccgacgacatctac
atctcgcccagccaggtccgccgcttcaacctgcacaccggcgacatgatcgaaggcgaa
gtgcgcacacccaaggatggcgagcgctactttgccctgaccaagctcgactccgtcaat
ggcggctcgcccgagcagaacaagcacaaggtgctgttcgagaatctgacccccctgttc
cccacccagcagctgcgcctggagcgcgagatcaagggcgaggagaacatcaccggccgc
atcatcgacatcatcgcccccatcggccgcggccagcgcgcgctgatcgtcgcgccgccc
aagagcggcaagaccatgatgatgcagagcatcgcccacgccatcacggccaaccatccc
gacgttcacctgatggtgctgctggtcgatgagcgccccgaggaagtgaccgagatgcag
cgttcggtcaagggcgagatcatcgcctccaccttcgacgagcccgccacgcgccacgtg
cacgtggccgagatggtgatcgagcgcgccaagcgcctggtcgaactcaagaaggacgtg
gtcatcctgctggactccatcacccgcctggcccgcgcctacaacaacgtcgtgccctcg
tcgggcaaggtgctgtcgggcggcgtggactccaacgcgctgcagcgccccaagcgcttt
ttcggcgcggcgcgcaatgtggaagaaggcggctcgctgaccatcatcgccacggccctg
gtcgataccggcagccgcatggacgaagtgatcttcgaagagttcaagggcacgggcaac
agcgaactggccctgaaccgccgcctctacgaaaagcgcgtgttccccgccatcgaactc
aacaagagcggcacgcgccgcgaagaactgctgctggctcccgagatcctgcagaagacc
cgcatcctgcgccagttcatgtacaacatggacgagatcgaggccatggagctgatgatc
aagaacatgcgggccaccaagaccaacgtggacttcttcgacatgatgcgccgcggcggc
tga
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