Delftia sp. UGAL515B_04: OK021_15465
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Entry
OK021_15465 CDS
T11538
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
delu Delftia sp. UGAL515B_04
Pathway
delu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
delu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OK021_15465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
delu03021
]
OK021_15465
Transcription machinery [BR:
delu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OK021_15465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
WON86174
LinkDB
All DBs
Position
complement(3383937..3384452)
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AA seq
171 aa
AA seq
DB search
MAAAPSHPDIALLYSDHHGWLVGWLRRRLGNPCDAADLAQDTFIRVLGKPQSLHGVREPR
AWLTTIAHGLVVDHTRRAALERACLDAIASLPEPLAPSAEERHLLIESLVRMDNLLAGLP
PKARSAFLLSRLEGLSYPEIALQLGVCLSSVEKYMATAIRHCLALRRELTA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgccttcgcaccccgatatcgccctgctctacagcgaccaccacggctgg
ctggtgggctggctcaggcgcaggctgggcaatccctgcgatgcggccgacctggcccag
gacaccttcattcgcgtgctgggcaagccccagtccctgcatggcgtgcgcgagccgcgc
gcctggctcaccaccatcgcccacggcctggtcgtggaccacacacgccgcgccgcgctg
gagcgcgcctgcctggacgccatcgccagcctgcccgagccgctggcaccctcggccgag
gagcgccatctgctgatcgaatccctggtgcgcatggacaacctgctggccggcctgccg
cccaaagcccgcagcgcctttctgctctcccgcctggaaggcctgagctacccggaaatc
gccctgcagctgggcgtgtgcctgagctccgtcgagaaatacatggccaccgccatacgc
cactgccttgccctgcgcagggaactgacggcgtga
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