Demequina sp. TMPB413: LGT36_001430
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Entry
LGT36_001430 CDS
T08088
Name
(GenBank) extracellular solute-binding protein
KO
K25676
pectin-derived oligosaccharide transport system substrate-binding protein
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dem02000
]
LGT36_001430
Transporters [BR:
dem02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Pectin-derived oligosaccharide transporter
LGT36_001430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
UPU88612
LinkDB
All DBs
Position
complement(314801..316132)
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AA seq
443 aa
AA seq
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MTRTSRSLTRRAAPVGAVLATALTLAACSSDAEEAPSGDVTGDAQEAVTIEMSWWGDDAR
AALFDEVITAFEAEYPYITVTQTPVGSPDDLFNRLATDFGGGGDTAPDVFALGGAKPQEY
GEAGALLDLGTVADIVNVAKYPEFSTTNAVVDGTLYGLPTGGNATAAFVNTDLFEAAGVP
IPDADWTWDDLVDAANTIGTAGLTNESGAPVYGIDLRVQDIIGTYVAQVSEFGLYDWEGQ
LAVDADQVAGWYEIEQRMLEGGGLPDPTIVTAGWALPPDQQLFTLGQAGVTFGYSNLVGT
YEMGGNTIILPPPSDTDKTGVALLPSAFWSINAATDHPEEAALLVDWFLNEPSAAELIQD
TRGVPFNPDTAAVVSPLLEGASKTAAEYVESVLDSGEVAPPQPNGAANMNKYSQDAETAV
LFGNANPQEAAQTFIDQLSGDLS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtacatcccgttcactgacacggagggcggcgccggtaggcgcagtcctcgcc
accgcgctcacccttgcggcgtgctcatctgacgccgaagaagcgccgtcaggcgacgtc
actggcgatgcgcaagaggccgtcaccattgagatgtcttggtggggtgacgacgctcgc
gcagcgttgtttgatgaggtcatcacggcattcgaggccgagtacccgtacatcactgtg
acccagacacccgtcggcagccctgacgacctgttcaaccgcctggccaccgactttggc
ggcggcggcgacacggctcctgacgtgttcgcactcggtggcgccaagccgcaggagtac
ggcgaggccggcgcactgctggacttgggcaccgtggcagacattgtcaacgtcgccaag
taccccgagttctccaccaccaacgcagtggtcgatggcaccctgtacggcctcccgacc
ggtggcaacgcgacggccgccttcgtgaacaccgacctgttcgaagcagccggcgtgccg
atccctgacgccgactggacgtgggacgacctggtggatgccgccaacaccatcggcacc
gccggcctgacgaacgagtcgggagcgcccgtatacggcatcgacctgcgcgtgcaggac
atcatcggcacctacgtggcacaggtcagcgagttcggcctctacgactgggagggccaa
ctcgctgtcgacgccgaccaggtcgctggttggtacgagatcgagcagcggatgctcgaa
ggcggaggactccccgaccccaccatcgtgacggcaggctgggcgcttcccccggaccag
cagctcttcacgctgggccaggcgggcgtgaccttcggctacagcaacctagtgggcacg
tacgagatgggtggcaacacgatcatcctgccgccgccgtccgacaccgacaagacgggg
gtcgcactgcttccctcggccttctggtcgatcaacgccgccaccgatcaccctgaagaa
gccgcactgctggtcgactggttcctcaacgaaccctccgcagccgagctgatccaggac
acgcgtggcgtgccattcaaccccgacaccgccgcggtggtctcgccgcttctcgaaggt
gcaagcaagactgccgccgagtacgtggaatcggtgctcgactctggtgaggttgccccg
ccgcagcccaacggagcggccaacatgaacaagtactcgcaagatgcggagacggcagtg
ctcttcggcaacgccaacccgcaagaggccgctcagacattcattgatcaactgtctggc
gatctcagctag
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