Demequina sp. TMPB413: LGT36_002165
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Entry
LGT36_002165 CDS
T08088
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_002165
Enzymes [BR:
dem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LGT36_002165
DNA repair and recombination proteins [BR:
dem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LGT36_002165
Prokaryotic type
LGT36_002165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UPU88750
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All DBs
Position
complement(470211..471548)
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AA seq
445 aa
AA seq
DB search
MASLWWIRRDARLADNPALLEAQADGPAAAVFPWSPRLRLWSGRRRAYLARSLWSLRQDT
YGAVAVRYGNPADVVLAAAREAGASVVWAQREHSPSGLREQDEVSRALAADDRELRLEGS
PYAVAPGRVRKADGTPYQVFTPFSRAWREHGWPRPATAADARGFAHLPSDIDLDQDAALG
DIQDPLGLPPPFTESAWRDRLDAFVGDALADYAEARDLPAVDATSRMSIPLAYGQIHPRT
LLAAAADAGAADGSFAKGAAVFASEVAWREFHADVLFHHPQALRSALKPVIPDDAWATGQ
EANAAFAAWTRGETGFPLVDAGMRELAATGTMHNRVRMVVASFLIKDLHVPWQRGTEHFR
RMLLDYDHAQNQLNWQWVAGTGRDAAPYFRVFNPDSQLAKFDPAGEYARRWLPDLDTPAY
PSRIVDHKVEREVALADFQRGKASG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctgtggtggatcaggcgcgatgcgcggctcgccgacaaccccgcccttctc
gaggcgcaggccgacggcccggccgccgctgtcttcccgtggtcccctaggctgcggctg
tggtcgggcaggcgccgcgcgtacctcgcccggtcgttgtggagcctgcggcaggacacc
tacggcgccgtcgccgttcgctacggcaacccggccgacgtcgtcctcgccgccgcgcgg
gaagctggggcgagcgtcgtctgggcacaacgcgagcactcgcccagcgggttgcgcgag
caagacgaggtcagccgcgcgctcgcggccgacgacagggaacttcgcctcgaaggctcg
ccttacgccgtcgcgccagggcgcgtgcggaaggccgatggaacgccgtaccaggtgttc
acaccgttctcgagggcgtggagggagcatgggtggccgcgccctgccacagcggccgac
gctcgcggcttcgctcacctcccctctgacatcgacctcgatcaggacgcggctttgggc
gacatccaggacccgctcggccttccgccgcccttcacggagtccgcgtggcgcgacagg
ctcgacgccttcgttggcgacgctctcgccgactacgccgaggcccgcgacctgccagcc
gtggacgccacctcccgcatgagcatcccgctcgcgtatgggcagatccatccgcgcacc
ctccttgcggcagcggccgacgcgggtgccgccgatggttcgtttgccaaaggagccgcg
gtcttcgcctcagaggtcgcgtggcgcgagttccacgccgacgtcttgttccaccacccg
caggccttgcgttcggctctgaagccggtgatccccgacgacgcgtgggctaccggacag
gaggcaaacgccgccttcgccgcatggacacgaggcgagacgggctttcccctggtcgac
gcagggatgcgcgaactcgccgccaccggcacgatgcacaaccgggtgcgcatggtggtc
gccagcttcctcatcaaggatctgcacgtgccgtggcagcgcggtaccgagcacttcagg
cgcatgcttctcgattacgaccacgcgcaaaaccagctcaactggcagtgggtcgccgga
acagggcgggacgccgcgccctacttcagggtattcaaccccgactctcagctcgcgaag
ttcgaccccgctggtgagtacgctcgtcgctggctgccggatctcgacacccccgcgtac
ccctcacgcatcgtcgaccacaaagtggaacgcgaagtcgcgttggcagactttcagcgc
ggcaaagcgagcggctag
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