Demequina sp. TMPB413: LGT36_002665
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Entry
LGT36_002665 CDS
T08088
Name
(GenBank) GAF domain-containing protein
KO
K07682
two-component system, NarL family, sensor histidine kinase DevS [EC:
2.7.13.3
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGT36_002665
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dem01001
]
LGT36_002665
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dem02022
]
LGT36_002665
Enzymes [BR:
dem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LGT36_002665
Protein kinases [BR:
dem01001
]
Histidine kinases
NarL family
LGT36_002665
Two-component system [BR:
dem02022
]
NarL family
DevS-DevR (redox response)
LGT36_002665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
GAF
HisKA_3
GAF_3
HATPase_c
HATPase_c_2
Tsp36_N
DUF4158
Motif
Other DBs
NCBI-ProteinID:
UPU88839
LinkDB
All DBs
Position
complement(562860..564452)
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AA seq
530 aa
AA seq
DB search
MSDAVTDAILSLNRQLDLPSVLNKMLEAAMKTTGAPLAAINVLDENGISVDFHYQGMDAS
IWQMIPRAPNSVGTLAEIPSEGTLVIAEITEHPSFKGLPKGHPPLGSFLGCALKARGSVF
GYLYLASKKGGFTKTDEATVQALASAASVAIDNAQLFEESLERENWLAASQAITTALLAN
PGDETAIARIVASAKELSGAAAAALVLPGIDDEWVMEFTHGEKADELLGLILPSDGFAMS
VIRAGQGTIAQEPPGPTILDPVRGFGPTLYAPLLAGARTLGLLMLWREKNYNTFDDHDLA
TAQRFSNQAALALQFAELAHVRNVSNLLEERERIADDLHDFVSQELFATAMQLEALTDDV
APEARDRLASTLEHVKRAQHEVRGVMSQLQGDRTSEPLAERVRRELILAQDSLGFVPFLS
VDDWGAASRAVDSDPTLSDDIIAVIRELLSNTARHAHATSSSVTISAKDGRLSVIIEDDG
VGPSGAFSRHSGTSNLANRALRRRGSFSLDPINEDAERPGTRAVWNVLAS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgcggtgacggacgcgatcctgtcgctcaatcgccaactcgacctgccctca
gtgctcaacaagatgcttgaggcggccatgaagaccacgggcgctccgctcgcggccatc
aacgtgctggacgagaacggcatctcagtcgactttcactatcagggcatggacgcatcc
atctggcagatgattccgcgcgcccccaatagcgtcggcacgctcgccgagatccccagc
gagggaaccctggtgatcgccgaaatcaccgaacacccctccttcaagggtctgccgaaa
ggtcacccgccgcttggctcgttccttggctgcgcccttaaggcgcgcggttccgtcttc
ggctacctctacctcgcctcaaaaaagggcggcttcaccaagactgacgaggcaacggtg
caggcgctcgcgtcggccgcctccgtcgcgatcgacaacgcccaactcttcgaagagtcg
cttgagcgcgagaactggctcgcggcatcgcaagccatcacgaccgcccttctcgccaac
ccaggagacgagacggccatcgcccgcatcgtggcgtcggcaaaggagctctctggggcg
gcggccgccgcactcgtcttgcctggtatcgacgacgaatgggtgatggagtttacccac
ggtgagaaggccgatgaactactagggctgatcctgccgtctgacggattcgcgatgtcc
gtcatcagggcaggccagggaacgatcgctcaagagcctcctgggccgacgatccttgac
cccgtgcgcggcttcggccccacgctgtacgcaccgctcttggcaggcgcacgcactctt
ggcctgctcatgctgtggcgagagaagaactacaacaccttcgacgaccacgacctggcg
accgctcagcgcttttccaaccaggccgcgcttgctctccagttcgccgaactcgcgcac
gtgcgcaacgtgtcgaacctgcttgaggagcgggagcgcatcgccgacgacctccatgac
ttcgtgtctcaggaactcttcgctacggccatgcagttggaggctttgacggacgacgtc
gctcccgaggcacgcgaccgcctcgcgtcgacgctcgagcacgtcaagcgcgcccagcac
gaggtgcgtggcgtgatgagccagttgcagggcgatcgcacgtcggaacccctcgccgag
cgtgtcaggcgggaactcatcctcgctcaggactcgttgggattcgtgccgttcctgtca
gtagatgactggggcgcagcttcgcgagctgtcgacagcgatccgaccctgtcggatgac
atcatcgccgtgattcgcgagttgctctcgaacacggcacggcacgctcacgcgacgtcg
tcctccgtcaccatttcagcgaaggacggcaggctgagcgtcattatcgaagacgacggc
gtgggcccttccggcgccttctcgcgccactcgggcacatcaaacctggcgaacagggcg
ctacgccgccgcggcagcttctctctcgaccccatcaacgaggacgccgaacggcccggc
acccgcgccgtgtggaacgtcctcgccagctag
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