Demequina sp. TMPB413: LGT36_003205
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Entry
LGT36_003205 CDS
T08088
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_003205
DNA repair and recombination proteins [BR:
dem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LGT36_003205
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
AAA_16
FtsK_SpoIIIE
ResIII
AAA_25
AAA_30
CbiA
AAA_10
AAA_6
AAA_19
AAA_7
nSTAND3
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UPU88943
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Position
complement(667898..669487)
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AA seq
529 aa
AA seq
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MASADDTTGPNSPEYAAAVAEGYTFKGESITVGALVQGEGATESAQVRLPLKMMNRHGLI
AGATGTGKTRTLQGLAESLSDAGVPVFVTDIKGDLSGMAVEGEPKDFIDERAADIGQEWA
AKAYPLEFYALGGIGKGVPLRTTVTDFGPLLMSKVLGLTDVQESAMGLIFHWADTNGLAL
LDLKDLRAVIQFLNSDEGKPELKDIGGVSSATAGVLLREISNLQAQGADDFFGEPAFDTM
DLLKTAPDGRGIISCLELPDLQDRPHLFSTFIMWLLADLFADLPEVGDPDKPRLVFFFDE
AHLLFTDASKDFLTQVTQTVRLIRSKGVGVFFVTQTPKDVPADVLGQLGSRVQHALRAFT
PDDATAMKATARTFPHSPYDLEEVLTTMGIGEAAVTVLSDKGAPTPVAWTRLCAPRGSMD
PAPEGVIDGIVRASPQAAAYGEVLDRESAYEKLAEKAAARSEAAQEAAEQEAAEQAEKKA
DAPKARSTRREKSVVEKVVTSQPVKTFARQAGREVGRQILRSVFGVLKR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcagacgacaccaccggccccaactcccccgagtacgccgcggcggtggcg
gagggctacacgttcaagggcgagtcgatcaccgtcggcgccttggtgcagggcgaaggc
gcgaccgaatcggcccaggtccgcctcccgctgaagatgatgaaccgccacggcctgatc
gcaggagcgaccggcacgggcaagacgcgcacgcttcagggcctggccgagtcgctttcc
gacgcaggggttcccgtgtttgtgacggacatcaagggtgacctgtccggcatggccgtc
gagggcgagcccaaggacttcatcgacgagcgcgcggccgacatcggccaggagtgggcg
gccaaggcctacccgctcgagttctacgccttgggcggcatcggcaagggcgtgccactg
cgcaccaccgtgaccgacttcggcccgctcttgatgtccaaggtgctgggcctcacggac
gtccaggaatcggcgatggggctgatcttccactgggcggacaccaacggcctcgcgctg
ctcgacctcaaggacctgcgcgccgtcatccagttcctcaactccgacgagggcaagccc
gagctcaaggacatcggcggcgtctcgtccgccacggcgggcgtgctgctacgcgagatc
tccaacctccaggcgcaaggcgccgacgacttcttcggcgagcccgccttcgacacgatg
gacttgctcaagaccgcccccgacggccgcggaatcatctcgtgcctcgaactgccggac
ctccaggaccgcccgcacctgttctccacgttcatcatgtggctgctggccgacctgttc
gcagacctcccagaggtgggagacccggacaagcctcgcctcgtgttcttctttgacgag
gcccacctgctcttcaccgacgcctccaaggacttcctcacgcaggtcacccagaccgtg
cgcctgatccgctccaagggcgtcggcgtattctttgtgacccaaacacccaaggacgtc
ccggccgacgtgctgggccagttgggttcgcgcgtccagcacgcgttgcgcgccttcaca
ccggacgacgctacggccatgaaggccacggcccgcaccttcccgcattcgccgtacgac
ctggaagaggtgctcaccacgatgggcatcggcgaggccgcggtgacggtgctgagtgac
aagggcgcccccaccccggtcgcgtggaccaggctgtgcgcgccgcgcggctccatggac
ccggcgcccgagggcgtgatcgatgggatcgttagggccagcccccaggccgcggcgtac
ggcgaggtgctcgatcgcgagagcgcctacgagaagctcgccgagaaggctgcggcgcgg
tcggaggcggctcaggaggccgccgagcaggaggccgccgagcaagccgagaagaaggcc
gacgcccccaaggcccgctcgacgcggcgggagaagtccgtggtggagaaggtggtgacc
tcgcagcccgtcaagactttcgctcgtcaggcgggccgcgaggtgggccgccagatcctg
cggtcggtgttcggcgtcctcaagcgttaa
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