Demequina sp. TMPB413: LGT36_003260
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Entry
LGT36_003260 CDS
T08088
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem03030
DNA replication
dem03430
Mismatch repair
dem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGT36_003260 (holA)
03430 Mismatch repair
LGT36_003260 (holA)
03440 Homologous recombination
LGT36_003260 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dem03032
]
LGT36_003260 (holA)
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_003260 (holA)
Enzymes [BR:
dem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGT36_003260 (holA)
DNA replication proteins [BR:
dem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGT36_003260 (holA)
DNA repair and recombination proteins [BR:
dem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGT36_003260 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UPU88954
LinkDB
All DBs
Position
681538..682548
Genome browser
AA seq
336 aa
AA seq
DB search
MPAPSSTRRANQGAPPWHRAKPAPVVLISGPEALLGSRAVSLIIAAATARDAETDVHRVE
AATYTAGLLRSAASPSLFGGTALVVIDGAESMNDAFLTDALEYVAAPDPEAVVVIRHGGG
NRGKKLLDAARAAGVPEFGCPAITRDADLVDFVASEFSRAGRQASAAAVRALVDSVGSDV
SQLAAACSQLTLDVDGGIDEAAVAKYYGTRVNATGFAVADAAVVGDRAKALALVRHALET
GTDPVPLVAAMASKLRTLAKVGAARGRGVDPTRDLGIAPWQVDKARRELRNWDADRLADA
IEHVAAADHAIKGGDRAPAFSIERLVRHIADLAADA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcgccctcctcgactcgccgcgccaaccaaggtgcaccgccttggcatcgcgcc
aagcctgcgcccgtggtgctgatctcagggccagaagctctcctcggcagccgggccgtg
agcctcatcatcgccgcggcaacggccagggacgcggagaccgacgttcaccgcgtcgaa
gccgcgacgtacaccgcaggcctgttgcgctcggcggcgagcccgtcgctgttcggtggc
accgccctcgtggtcatcgatggggccgaatcgatgaatgatgcctttctcacggacgcg
ctcgagtatgtcgctgcgcccgaccctgaggcggtggtggtcatcaggcacggcggcggc
aacaggggcaagaagctcctcgacgcagcgcgcgctgcaggcgttcccgagttcggctgt
cccgcgatcacgcgagatgccgatctggtcgactttgtcgcgtccgaattttcgagggcc
gggcgccaagccagcgccgccgccgtacgagcccttgtcgattcggtgggctcggatgtc
tctcaactcgccgcggcctgctcacaattgacgctcgatgtcgatggcgggatcgatgag
gccgcggtcgccaagtattacggcactcgcgtcaacgccaccggatttgccgtggccgac
gccgccgtcgtcggcgatcgcgccaaggcactcgcactcgtgcggcacgccttggagacg
ggaaccgacccggtgccgctcgtcgccgccatggcgtcaaagctgcgcacccttgccaag
gtgggagctgcgcgcggcaggggagtagaccccactcgtgacctcggcatcgctccttgg
caagtcgataaggccaggcgcgagctcaggaactgggatgccgaccgcctcgcggacgcg
atcgagcacgtggcagcggccgaccacgcgatcaagggcggtgacagggcgccggccttc
tcgatcgagcggctggtgcgccacatcgcagacctggcggccgacgcctag
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